Malus sylvestris (European crab apple): 126619662
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Entry
126619662 CDS
T09027
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126619662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126619662
04147 Exosome [BR:
msyl04147
]
126619662
04090 CD molecules [BR:
msyl04090
]
126619662
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126619662
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126619662
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126619662
CD molecules [BR:
msyl04090
]
Proteins
126619662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
126619662
NCBI-ProteinID:
XP_050144040
LinkDB
All DBs
Position
1:21256353..21264438
Genome browser
AA seq
1406 aa
AA seq
DB search
MMINRGLFGWSPPHIQPLTPVSEVSEPPESPSPYMEQSNDASAQPMEQEEEMEEQEEMEP
PPAAVPFSKLFTCADRLDWVLMTVGSLAAAAHGTALVVYLHYFAKIIHILWVERDHKGEP
PPMNDEQFQKFMDLSLSIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDM
SFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWQIAAITL
ATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT
SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTSHEAHGGEIITALFAVI
LSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSTVNHEGSALATVQGNIEFRNVYFSY
LSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL
RLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFITSLEGGYDT
QVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAEKAVQEALDVLMLGRST
IIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLKNEEAAKLPRRMPVSY
KETATFQIEKDSSASNSFQEPSSPKMMKSPSLQRTTGMFRMGDNTFNSQESPKAKSPPAE
KVLENGQALDSEDKEPSIKRQDSFEMRLPELPKIDVHSANHQTSNGSDPESPVSPLLTSD
PKNERSHSQTFSRPHSHSDDFPMKVNEAKCRNYKKAPSFWRLAQLSFAEWLYAVLGSIGA
AIFGSFNPLLAYVIALIVTAYYRVDEGRHLKPEVDKWCLLIACMGIVTVVANFLQHFYFG
IMGEKMTERVRRMMFSAMLRNEAGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQ
DSAAVVVALLIGVLLQWRLALVALATLPVLTISAIAQKLWLAGFSRGIQEMHRKASLVLE
DAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFFHGMAIGFAFGFSQFLLFACNALLLW
HTARTVKNKHMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKI
EPDENSAMKPPNVYGSIELKNVDFCYPTRPELLVLSNFSLKVNGGQTVAVVGVSGSGKST
IISLIERFYDPVAGQVLLDGRDLKVYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNA
SEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLD
EASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDN
LMSKNGLYVRLMQPHFGKGLRQRRLV
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaatcggggactgttcgggtggtccccgccgcacatacagcccttgacgccg
gtctcagaggtgtcggagccgccagagtcgccttcgccgtatatggagcagagtaacgac
gcgtcggctcagccgatggagcaggaggaggagatggaggagcaggaggagatggagccg
ccgccagctgccgtgcccttctcgaagctgttcacctgcgctgaccggctcgattgggtt
ctgatgactgttgggtcgcttgccgcggcggctcacgggacggctctggtggtgtacttg
cactacttcgctaagattattcatatactctgggtcgagcgtgaccacaagggcgagccg
ccgccaatgaacgacgagcagttccagaagtttatggatctttctttgtccatcgtttat
attgccgctggtgtttttgctgctggttggattgaggtctcatgctggattctgacggga
gaacgccagactgctgtcatcaggtcaaactatgttcaagtattacttaaccaggatatg
agtttttttgatacctatgggaacaacggggacattgtgagccaagtattgagtgatgtg
ttgctcattcagtctgctcttagtgaaaaagttggaaattatattcataacatggctaca
tttttcagtggtctcattattggattcatcaactgttggcagattgcggctataacatta
gccaccggtccttttattgtggctgctggaggaatatcaaatatatttcttcataggctt
gctgagaatattcaagatgcatatgctgaagcagctagcattgctgaacaggcagtctct
tacattaggacgttatatgcatttacaaatgaaacattggccaagtattcgtatgctaca
tcactgcaagcaactctaagatatggcatattgataagtcttgtgcaaggacttggactt
ggattcacttatggccttgccatttgttcttgtgccctgcaactgtgggttggaaggttc
ctggttactagtcatgaagctcatggtggtgaaattataacagccctttttgctgtaata
ttaagtggccttgggctgaatcaagcggcaacaaacttctactcatttgaccaaggtcga
attgctgcttatagactttttgagatgataagtcgatcatcctctactgttaatcacgag
ggaagtgccctagcgactgtacaaggaaatattgagtttcgaaatgtatatttcagttat
ctatctcgtcctgagatccccatattgagtggtttttacctcactgtacctgctaagaaa
gctgtagcactcgttggcagaaatggttcaggaaagagcagtattatccccctcatggag
cggttttatgatccaactttaggagaagttcttttggatggagaaaatatcaaaaacctg
agactggagtggctaagaagtcagatagggctagtcacacaggagcctgctttgctgagt
ttaagtataagagacaatattgcttatgggcgggatgctacaatggaccaaattgaagaa
gctgctaaaatagcgcatgcgcatacatttattacctcacttgagggaggatacgataca
caggtgggaagagcaggcttagcattgacggaagagcaaaaaataaaactttcaattgcc
agagcagtacttctgaacccctcaattcttttgcttgatgaggtcactggtggacttgat
tttgaagctgaaaaagccgttcaagaagctctagatgtccttatgttggggcgttcaact
ataattatagctcggcggcttagtcttataaggaatgctgattacatagctgtgatggag
gaaggccaactagttgaaatgggtacccatgatgagttattaaacctggatggcctctat
gcggagcttctcaaaaatgaagaagctgcaaaacttcctaggaggatgccagtgagctac
aaggaaactgcaactttccaaattgaaaaggattcttcggcaagtaatagcttccaagaa
ccatcatctccgaaaatgatgaaatcaccctcccttcagagaactactggcatgttccgg
atgggtgataacacttttaactcacaggagtcaccaaaagctaagagcccaccagcagag
aaagtgttggaaaatggtcaggccttggattcagaagataaggaaccatcaataaaaagg
caggatagttttgaaatgagactaccagagttacccaagattgatgtccattctgctaat
caccaaacgtcaaatggttcggaccctgaatcccccgtttcaccccttctgacatctgat
ccgaaaaatgagcggtcccattcacaaacctttagccgcccccatagtcattcagatgac
tttcccatgaaagtgaatgaagcaaaatgtagaaattataagaaggcaccatcattttgg
aggcttgcacaacttagttttgctgaatggctgtatgctgtgttaggaagcattggtgct
gctatctttggttctttcaatcctcttcttgcttatgtaatcgcactgatagtaacagca
tactacagagttgatgaaggtcgtcacttgaaaccggaagtagacaaatggtgcttgctc
attgcttgtatgggtatagtgacagtcgttgccaatttcttgcagcatttctactttggt
ataatgggtgagaaaatgactgaacgagttcgtagaatgatgttttcagcaatgctacga
aatgaagcaggatggtttgatgaagaggaaaacagtgctgataccttatccatgcgcttg
gccaatgatgccacatttgtacgagctgctttcagcaatcggctgtcaatatttatacag
gatagtgctgctgttgttgttgctcttcttatcggggtgctgctacaatggcgattagca
cttgtggctttggcaaccctacccgttctcactatttctgccattgcacagaaattatgg
cttgctggtttttcaaggggaattcaggagatgcacaggaaggcatctttggttcttgag
gatgcagttagaaacatttacactgttgtagcattctgtgctggtaataaggtaatggag
ctctacaggttgcagctaaagaaaatattcaagcagagtttctttcatggaatggccatt
ggctttgcatttggcttttcgcagttccttctttttgcctgcaatgcccttctcctctgg
cacactgcacgcactgtgaaaaataagcatatggatctacctactgctctcaaggagtat
atggttttctcttttgctacatttgcacttgtagagccttttgggctggctccttacatc
ctgaagcgccgaaaatctctcatttcagtttttgaaatcatagatcgagtgccgaagatt
gagccagatgaaaactcagcgatgaaaccacctaatgtttatggaagcattgagttgaaa
aatgttgacttctgttatccaacccgcccagaactgttggtactgagcaatttcagtctc
aaagtaaatggggggcaaactgtagctgtggtgggagtttcagggtcaggaaagagcact
ataatttctttgattgagagattttatgatccagttgctggtcaagtcttactggatggt
cgagatctgaaagtttataatttgagatggttgaggaaccacctaggtcttgttcagcag
gaacccattatattctcgacaaccattcgggaaaatattatatatgcaaggcacaatgct
agtgaggctgagatgaaagaggcagccagaatagcaaatgctcaccatttcatcagcagc
ttgcctcatggttatgatacgcatgtggggatgagaggtgttgacttgaccccgggacag
aaacagagaattgcaatagcacgcgtcgtgctaaagaacgcccccatcttactattggat
gaagcaagctcgtccattgaatctgaatctagtcgagtggtgcaggaggctcttgataca
ttaatcatggggaacaaaacaaccattttgatagcccatagagctgcaatgatgaggcat
gtcgataacattgtagttctcaacggagggagaattgtggaagaagggtcccatgataat
ttaatgtcaaagaatggtctctatgtccgtttgatgcaaccacactttggcaagggtttg
cgtcagcgtcgcctcgtttag
DBGET
integrated database retrieval system
