Malus sylvestris (European crab apple): 126621298
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Entry
126621298 CDS
T09027
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126621298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126621298
03051 Proteasome [BR:
msyl03051
]
126621298
Membrane trafficking [BR:
msyl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
126621298
Proteasome [BR:
msyl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
126621298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
XPC-binding
Rad60-SLD_2
Dsc3_N
HOIP-UBA
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
126621298
NCBI-ProteinID:
XP_050145680
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Position
5:25973899..25977886
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AA seq
550 aa
AA seq
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MGGEGDSSEPKVSGEGGEGGEQINIRCSNGSKFSVRASLDSTVGAFKEVLSQNCDIPADQ
QRLIYKGRILKDDQTLTSYGLQTDHTVHMVRAFAAPASTPAPPAANATSASPTTAPGVTR
GVGSTEREGLQTPDLGASLLFGQGLNPLGGGGGQGLFGAGLPEFEQVQQQLTQNPNMMRD
IMNMPAIQSLMNNPDLMRGLIMNNPQMRDIIDRNPELAHVLNDPGILRQTLEAARNPELM
REMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTGNAGNDLGSNPFSALLGNQG
GAQARDGSNNPSTTGSETPAGSVAPNTNPLPNPWGAAGGGNQPNTTRTNPVGDGRAAGIA
GLGGLGLPGMEQMLGGMPDANAMNQLLQNPAISQMMQSMLSNPQYMNQILNPQLRGMVDS
NPQFREMMQNPELLRQLTNPETMQQMLALQQSLFSGNRQQPTQDPTLTGGATGAPNNAGL
EMLMNMFGGLGAGSLAAANPNVPPEELYENQLRQLQEMGFFDTQENIRALQATSGNVHAA
VERLLGNPGA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggagggcgattccagcgagcctaaagtcagtggcgaaggaggagaaggagga
gagcagattaacattcgatgctcgaatggttccaagttttcagtgagggcgagcctggac
tcgactgttggggcattcaaggaagttttgtctcagaattgcgatattccagctgatcag
cagaggttgatttacaaaggtcgtattttgaaggacgaccagaccctcactagttatggt
ctgcagacagatcatactgttcacatggtccgtgcctttgctgcacctgcatcaaccccc
gctcctcctgctgctaatgctacttctgctagtcctacaactgctccaggtgttactcgc
ggtgttggttccactgagcgtgaggggcttcagactcctgaccttggggcatctttgttg
tttgggcagggtttaaacccactcggtggtggtggaggacaggggttatttggagctggt
cttccggaatttgaacaagtgcagcagcaactgactcagaacccgaacatgatgagggac
ataatgaacatgcctgccattcagagtttgatgaataaccctgatttgatgcgtggcttg
attatgaacaatccgcaaatgcgtgatatcattgaccggaacccagagcttgcacatgta
cttaatgatcctggcattctccgacagacattggaagctgcaaggaaccctgaactcatg
cgtgagatgatgcgaaacactgacagggcaatgagtaacattgaatcttcccctgaggga
ttcaacatgctgaggcggatgtatgaaaacgttcaggagccatttttgaatgctacaacc
gggaatgctggaaatgatttgggttcaaatccattttctgctcttttgggcaaccagggt
ggggcacaggcccgggatgggtctaacaacccttcaaccactggctcagaaacacctgca
ggttctgttgctcctaatacaaacccacttcctaacccttggggcgctgctggtggagga
aatcagccaaatactaccaggacaaatcctgttggggatggaagggcagccggtattgct
ggcctgggaggtcttggtctccccggaatggaacagatgcttggtggcatgccagatgct
aatgcaatgaatcagcttttgcagaatccagcgatatcacaaatgatgcaaagcatgctt
tccaatccccagtacatgaatcagattctgaatccacaactacgcggaatggttgattca
aatcctcaatttagagaaatgatgcaaaatccagagctactgcggcagttaacaaaccct
gaaacaatgcagcaaatgctcgcgttacagcagtcgctattttcaggcaatcgacagcaa
ccaactcaggatccaactctcactggtggtgctacaggtgcacccaataatgctgggttg
gagatgctgatgaacatgtttggaggtcttggagctggcagcttggccgcggcaaaccct
aatgtaccaccggaagagctgtatgaaaatcagctaaggcagcttcaagaaatgggtttc
ttcgatacccaagagaatatcagggcattgcaagccacttctgggaacgtccacgctgcg
gtggagcgacttttagggaatcccggggcgtaa
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