Malus sylvestris (European crab apple): 126624094
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Entry
126624094 CDS
T09027
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126624094
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
126624094
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
126624094
NCBI-ProteinID:
XP_050149068
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Position
5:complement(42329513..42331500)
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AA seq
541 aa
AA seq
DB search
MPVCSNCRGKTFVRDDVTENLSCSTCGKLQEYDNYVHQYGGVSGPTGTFVSVGTTGSGNV
YSYKETKVYEALKFIESMSLRLGLSTAEADAVKAMAREVTVGEYGQGNWFNIFVGACAYV
AMRRDNKSLPIAEVVSVIGGTDVYELGRMIMRIVNFLDLKKPEFPEFDIVNLFERTLRNS
YSFEGIEGDKRERMRKQGIFLLNCAKKWFLTTGRRPLPMVAAVLALVAELNGVGVRIEDL
AKEIHAVVHTCKLRYRELLEALVKVAQALPWGKDVTVKNVIKNAPFVIQYMERKLMSEPS
GKKDLVGGICLDLGDVREYLRNDSGYASDFCFEDDFDTEMDKLKLSHESRYFEVEDGGCK
LGVEEMDALKLSHECLSMIYSKFSDEVDNVKSSKGFEEVRGTKKRRGFALHACAEWWNGQ
SEMSKRLLLKEILEKDVGLDAIPPSFVNGCVAVKRRKEKINAAKQRIDRIMCPSNARSGD
SSDICISEEVHTRKKRKRGRGIDWEDLIIETLLLHKVKEEEIEKGWYSVLLELYVFNSGV
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctgcagcaattgccgcggcaaaaccttcgtccgcgatgacgtcaccgaaaac
ctctcctgctccacctgcggcaagctccaagagtacgacaactacgtccaccaatacggc
ggcgtctccggccccaccggcaccttcgtctccgtcggcaccaccggctcgggcaacgtt
tacagctacaaagagacgaaagtttacgaagccctaaaatttatcgaatccatgtcgctc
cgcctcggcctctccaccgccgaggccgacgccgtcaaagccatggctagggaagtcacg
gtaggtgagtacggccaaggtaattggttcaatattttcgttggtgcttgcgcgtatgtt
gccatgagaagggacaataagtccttgccgatcgccgaggtcgtttcggtgatcggcggc
acggatgtttatgaattgggtaggatgataatgcgtatagttaattttttggatttgaaa
aaacccgagtttccggaattcgatattgtcaatttgttcgagcggacgctgaggaattcg
tatagtttcgagggaattgaaggagataagagggagagaatgagaaaacaggggatattt
ctgctaaattgtgcaaagaagtggtttttgacaaccgggcgtaggccgcttccgatggtg
gcggcggtgttggctcttgtggcggagttgaatggtgttggggttaggattgaggacttg
gctaaggagattcatgctgttgtccatacttgtaaattgcggtacagggagcttttagag
gcgcttgtgaaggttgcacaggccttgccttgggggaaggatgttacggttaagaatgta
attaagaatgcgccgtttgtcattcagtatatggagaggaagttgatgtcggagccgagt
gggaaaaaggatttggtgggcggcatttgtttggatttgggagatgttagagaatatttg
aggaatgatagtggatacgcaagtgatttctgttttgaagatgattttgatacagaaatg
gataagttaaagctttcacatgagtctcggtactttgaggtggaagatggtgggtgcaaa
ttgggggttgaggaaatggatgcgctgaagctttcacatgaatgcttatcaatgatttac
tcaaagttttcggatgaggttgacaatgttaagtcctctaaggggtttgaagaagttcgt
ggaacaaaaaagaggcgaggttttgcgctccatgcttgtgctgagtggtggaatggacag
tcggaaatgagcaagaggcttctgcttaaggagatattggagaaagatgtaggattggat
gctatacctccgtcttttgttaatggttgtgtagcagttaagaggaggaaagaaaagata
aatgctgccaagcagcgaattgatagaattatgtgtccatcaaatgctcgttcaggtgac
agcagcgacatttgcatttctgaagaggtacatactaggaagaagagaaagagaggacga
ggcattgattgggaagatttaattattgaaaccctcctccttcataaagtaaaagaggag
gaaatcgagaaggggtggtacagtgtactactggaattatatgtatttaactctggggtt
gtgtga
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