Malus sylvestris (European crab apple): 126628793
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Entry
126628793 CDS
T09027
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126628793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126628793
04147 Exosome [BR:
msyl04147
]
126628793
04090 CD molecules [BR:
msyl04090
]
126628793
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126628793
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126628793
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126628793
CD molecules [BR:
msyl04090
]
Proteins
126628793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_21
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
126628793
NCBI-ProteinID:
XP_050154586
LinkDB
All DBs
Position
7:26921221..26929496
Genome browser
AA seq
1407 aa
AA seq
DB search
MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYMEQSIDASAQPMEQEEEMDEQEEMEP
PPAAVPFSRLFTCADRLDWVLMTVGSIAAAAHGTALVVYLHYFAKIIHVLWIGHNPKGEP
PQMNDEQFQKFMDLSLSIMYIAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDM
SFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWQIAAITL
ATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYAT
SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVNSHKAHGGEIITALFAVI
LSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSTVNHEGSSLATVQGNIEFRNVYFSY
LSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL
RLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFITSLEGGYDT
QVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAEKAVQEALDLLMLGRST
IIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKNEEAAKLPRRMPVRN
YKETATFQIEKDSSASNSFQEPSSPEMMKSPSLQRTTGMFRMGDNTFNSQESPKAKSPPA
EKVLENGQAVDSTDKEPSIKRQDSFERRLPELPKIDVQSANFQTSNGSDPESPVSPLLIS
DPKNERSHSQSFSRPHSHSDDFPMKANEVKSTNYKKAPSFWRLAQLSFAEWLYAVLGSIG
AAIFGSFNPLLAYVIALIVTSYYRVDEGRHLRQEVDKWCLIIACMGIVTVVANFLQHFYF
GIMGEKMTERVRRMMFSAMLRNEAGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFI
QDSAAIIVALLIGMLLQWRLALVALATLPVLTLSAIAQKLWLAGFSRGIQEMHRKASLVL
EDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFFHGMAIGFAFGFSQFLLFACNALLL
WYTARMVKNEHMDLPTAIKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPK
IEPDENSAMKPPNVYGSLELKNVDFCYPTRPELLVLSNFSLKVNGGQTVAVVGVSGSGKS
TIISLIERFYDPVAGQVLLDGRDLKVYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN
ASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLL
DEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHD
NLMSKNGLYVRLMQPHYGKGLRQHRLV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatctcgggggctgttcgggtggtccccgccccacgtacagcccttgacaccg
gtctcagaggtgtcggagccgcccgagtcgccgtcgccgtacatggagcagagtatcgac
gcgtcggcacaaccgatggagcaggaggaggagatggatgagcaggaggagatggagccg
ccgccagctgccgtgcccttctcaaggctgttcacctgcgcggaccggctcgattgggtt
ctgatgactgttgggtcgatcgccgcggcggctcacgggacggctctggtggtgtacttg
cactacttcgctaagattattcatgtactatggatcggccataacccaaaaggggagccg
ccacaaatgaacgacgaacagttccagaagtttatggatctttctttgtccatcatgtat
attgccgttggtgtttttgcagctggttggattgaggtctcatgctggattctgacggga
gaacggcagactgctgtcatcaggtcaaaatatgttcaagtattacttaaccaggatatg
agtttttttgatacctatgggaacaatggggacattgtgagccaagtattgagtgatgtg
ttgctcattcagtctgctcttagtgaaaaagttggaaattatattcataacatggctaca
tttttcagtggtctgattattggattcatcaactgttggcagatcgcggctataacttta
gccaccggtccttttattgtggctgctggaggaatatcaaatatatttcttcataggctt
gctgaaaatattcaagatgcatatgctgaagcagctagcatagctgaacaggcagtctct
tacattaggacgttatatgcatttacgaatgaaacattggccaagtattcgtatgctaca
tcactgcaagcaactctcagatatggtatattgataagtcttgtgcaaggacttggtctt
ggattcacttatggccttgccatttgttcttgtgccttgcaactgtgggttggaaggttc
ctggttaatagtcataaagctcatggtggtgaaattataacagcgctttttgctgtaata
ttaagtggccttgggctgaatcaagcggcaacaaacttctactcatttgatcaaggtcga
attgctgcttatagactttttgagatgataagtcgatcatcctctactgttaatcacgag
ggaagttccctagcgactgtacaaggaaatattgagtttcgaaatgtatatttcagttat
ctatctcgtcctgagatccctatattgagtggtttttacctcaccgtgcctgctaagaaa
gctgtggcactcgttggcagaaatggttcgggaaagagcagtattatccccctcatggag
cggttttatgatccaacattaggagaagttcttttggatggagaaaatatcaaaaacctg
agactggagtggcttcgaagtcagatagggctagtcacacaggaacctgctttgctgagt
ttaagtataagagataatattgcatatgggcgggatgctacaatggatcaaattgaagaa
gctgctaaaatagctcatgcgcatacatttattacctcacttgagggaggatacgataca
caggttggaagagcaggcttagcattgacggaagagcaaaaaataaaactttcaattgcc
agagcagtacttctgaacccctcaattcttttgcttgatgaggtcactggtggactagat
tttgaagctgaaaaagctgttcaagaagctctagatcttcttatgttagggcgttcaact
ataattatagctcggcggcttagtcttataaggaatgctgattacatagctgtgatggag
gaaggtcaactagttgaaatgggtacccatgatgagttattaaccctggatggcctctat
gcggagcttctcaaaaatgaagaagctgcaaaacttcctaggaggatgccagtgaggaac
tacaaggaaactgcaactttccaaattgaaaaggactcttcggcaagtaatagcttccaa
gaaccatcatctccggaaatgatgaaatcaccctcccttcagagaactactggcatgttc
cggatgggtgataacacttttaactcacaggagtcaccaaaagctaagagcccaccagca
gagaaagtgttggaaaatggtcaggccgtggattcaacagataaggaaccatcaataaaa
aggcaggatagttttgaaaggagactaccagagttacccaagattgatgtccagtctgcg
aatttccaaacgtcaaatggttcggaccctgaatcccccgtgtcaccccttttgatatct
gatccaaaaaatgagcgttcccattcacaatcctttagccgccctcatagtcattcagat
gactttcccatgaaagcgaatgaagtaaaaagtacaaattataagaaggcaccatcattt
tggagacttgcacaacttagttttgctgagtggctgtatgctgtgttaggaagcattggt
gctgctatctttggttccttcaatcctcttcttgcttatgtaatcgcactgatagtaaca
tcgtactatagagttgatgaaggtcgtcacttgagacaggaagtggacaaatggtgcttg
atcattgcttgtatgggtatagtgacagtcgttgccaatttcttgcagcatttctacttt
ggtattatgggtgagaaaatgactgaacgggttcgtagaatgatgttttcagcaatgctg
cgaaatgaagcgggatggtttgatgaagaggaaaacagtgctgataccttatccatgcgc
ttggccaacgatgctacatttgtacgagctgctttcagcaatcggctgtcaatatttata
caggatagtgctgctattattgtggctcttcttattgggatgctgctacaatggcgatta
gcacttgtggctttggcaaccctaccagttctcactctttctgccattgcacagaaatta
tggcttgctggtttttcaaggggaattcaggagatgcacaggaaggcatctttggttctc
gaggatgcggttagaaacatttacactgttgtagcattctgtgctggtaacaaggtaatg
gagctctacaggttgcagctgaagaaaatattcaagcagagtttctttcatggaatggcc
attggatttgcatttggcttttcgcagttccttctttttgcctgcaatgcccttctcctc
tggtacactgcacgcatggtgaaaaatgagcatatggatctacctactgctatcaaggag
tatatggttttctcttttgctacatttgcacttgtagaaccttttgggttggctccttac
atcctgaaacgccgaaaatctctcatttcagtttttgaaatcatagatcgagtgccgaag
attgagccagatgaaaactcagcgatgaagccacctaatgtttatggaagccttgagttg
aaaaatgttgacttctgttatccaactcgcccagaactgttggtactgagcaatttcagt
ctcaaagtaaatggggggcaaactgtagctgtggtgggagtttcagggtcaggaaagagc
actataatttctttgattgagagattttatgatccagttgctggtcaagtcttactggat
ggtcgagatctgaaagtttataatttgagatggttgaggaaccacctaggtcttgttcag
caggagcccattatattctcaacaaccattcgggaaaatattatatatgcaaggcacaat
gctagtgaggccgagatgaaagaggcagccagaatagcaaatgctcaccatttcatcagc
agcttgcctcatggttatgatacgcatgtggggatgagaggtgttgacttgaccccggga
cagaaacagaggattgcaatagcacgtgtcgtgctaaagaatgcccccatcttattattg
gatgaagcaagctcgtccattgaatccgaatcaagtcgagtggttcaggaggctcttgat
acattaatcatggggaacaaaacaaccattttgatagcccatagagctgcaatgatgagg
catgttgacaacattgtagttctcaacggagggagaatcgtggaagaagggtcccatgat
aatttaatgtcaaagaatggtctctatgtccgtttgatgcaaccgcactatggcaagggt
ttgcgtcagcatagactcgtctag
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integrated database retrieval system
