Malassezia sympodialis: MSY001_2127
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Entry
MSY001_2127 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
msym
Malassezia sympodialis
Pathway
msym03022
Basal transcription factors
msym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSY001_2127
09124 Replication and repair
03420 Nucleotide excision repair
MSY001_2127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msym03021
]
MSY001_2127
03400 DNA repair and recombination proteins [BR:
msym03400
]
MSY001_2127
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MSY001_2127
DNA repair and recombination proteins [BR:
msym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MSY001_2127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
RD3
Motif
Other DBs
NCBI-GeneID:
30057012
NCBI-ProteinID:
XP_018740671
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MAARRDENYVDGAEFDDSDELIEENSDDSDEFHALPSLAHSSVKSTLTLGSKRKAGEAHD
DAAASGSASRTEKRKQSQKNAGYSWEAAYQRSWDHVQEDESGNLESAVRQMLEVSKRKRS
LRDSAPVQRGIIRHLVLVLDLSEDMMDRDLRPTRYVPLRKLTSSFDLTLQLCRQFVSDYF
DQNPIGQLAIVCARDGLAERLSLMGGNTFDHGAVLASKRKLEPRGEPSLQNALEMARNCL
SYV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgtagggacgagaactacgtagacggcgctgagtttgatgattctgacgaa
ctcattgaggaaaattctgatgactcggatgagttccacgcgctgccatctctcgcgcat
tcatccgtcaagtccactttgacgttggggtctaagcgcaaggcaggcgaggcgcacgac
gacgcagccgcctctggaagtgcctcgcgaaccgaaaagagaaaacaatcgcagaaaaat
gctggatacagttgggaagctgcgtaccaacgctcatgggaccatgtacaagaagatgaa
agcggaaatttggagagcgctgttcgacaaatgttggaggtcagtaaacgcaagcgcagt
ctccgtgatagcgcacctgtacagcgcggtatcattcgacacctagttcttgttttagat
ctgagtgaggatatgatggaccgggacttgcggccaactcggtatgtgcctctgcgcaaa
ctgacgagtagcttcgacttgacgctccagctatgtcgacagtttgtgtccgactatttt
gaccaaaatcctatcggacagctggccattgtttgtgctcgtgatggacttgccgagagg
ctctccttgatgggcgggaacacgttcgatcatggtgccgttcttgctagcaaacgcaaa
ctcgaacctcgaggtgaacctagcctccaaaacgcccttgaaatggcccgcaactgcctc
tcgtatgtgtga
DBGET
integrated database retrieval system
