Malassezia sympodialis: MSY001_3478
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Entry
MSY001_3478 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
msym
Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_3478
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
MSY001_3478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
Rrp44_CSD1
Metal_CEHH
Motif
Other DBs
NCBI-GeneID:
30058362
NCBI-ProteinID:
XP_018741945
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MNPSFRFPSSQPTSAPAVPRDNVEQQRQAIQQQIELLQRQQEQLQLQQQLLRAPGVRSAE
RAGFSAAPGGPTWSHSSPRHVSGSESTSLRVPPLSFPPRHAADGGRAPQALRETDRKPSH
TRHASYQLSSELSPQFLMAGGGLLNLATLSVSGGWGDLADGFSEAPAERASGSGARHMRS
SSTSAAQWRVPTQEDLQAGLPQAQAQLAALHRSRQQMAPTMHGRAASHGRSASAGGSAPR
RALFGSYLPQSSLPLLLLAGKLVVGVIRVNKRNRSDAWVSTEVLGHDIFISGSKDRNRAL
EGDLVAVELLDPQEVWQTKREKVDKKKRKEESSGADAPAALTAPVSSRRPDKARDDMEVE
GAQLGLIEDEEESELSPPALAGHVVAIVERMPGQIFPGTLALLRPSSAATKEKQQAERSA
SGSAAPPDDDAGAPRPKIVWFRPTDKRVPLVAIPADQAPADFWDEKRQEVYSRTLFVACI
KRWPISSLHPFGALVDQLGPIGSLAAESQALLRAQCQSHTTPFSDAALHSVPGSTWTIPP
AERARRTFTAFTLRARGPRELAFSVDADGATLTLGVHAADIAHFVPSGSALDREARRRGA
SVAQVDQLHDMFPPSLLAHVALHPAREALTQSVVFTVEHGAVTRVWIGRSLVRIAEDVDA
DALDAALAAPAEGVLAALPAAHALLARWRSERVARGALLLPRSAPAQLPRAVQTLPAAAW
PAAAALLAQALPAPKLYVPGLVDMAQFSHYSLAEPLYTLFTSPLQRFADVQVHRQLDGVT
QGVLGEQDAEAVAKLAQQCQVKLRAARVAESQSQHLYLCDWLARTSVDTLAPREALVIAV
HATSFDVRVPSLAVEKRVHLDCLPLDAAHWDEPSRALTLQWRAGVHPIAWLAQAIDDAAC
ARLWATHGARLVLASGSAQRIAPLTRLAVYVLADMDKSPPILKVVRVPPSGL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtccttccgctttccctcgtcgcagccgacctctgcacctgctgtaccgcgc
gacaacgtcgagcagcagcggcaggcgatccaacagcagatcgagctgctgcagcggcag
caggagcagctgcagctgcagcagcagctcttgcgcgcgccgggcgtgcgctccgcggag
cgtgccggattcagcgcggcgcccggcggaccgacctggtcgcacagctcgccgcggcac
gtctcgggcagcgagtcgacgagcctgcgtgtgccgccgctgtcgttcccgccgcggcat
gcggcggacggcgggcgcgcgccccaggcactgcgcgagacggaccgcaagccgtcgcac
acgcggcatgcgtcgtaccagctgtcgtcggagctctcgccgcagtttctcatggcgggc
ggcggcctgctcaatctcgcgacgctgagcgtcagcggcgggtggggcgacctggcggac
gggttctccgaggccccggctgagcgcgcgagtggcagcggcgcgcggcacatgcgctcg
agcagcacgtccgcggcgcagtggcgtgtcccgacgcaggaggacctgcaggcgggcctg
ccgcaggcgcaggcgcagctcgccgccctgcaccgcagccggcagcagatggccccgacg
atgcacgggcgtgccgcctcgcacggccgctccgccagcgcgggcggcagtgcgccgcgc
cgcgccctgttcggcagctacctcccgcagtcgagcctgccgctcctgctcctggccggc
aagctcgtcgtgggcgtcatccgcgtgaacaagcggaaccgcagcgatgcgtgggtctcg
accgaggtgctgggccacgacatcttcatcagcggctccaaggaccgcaaccgcgcgctg
gagggcgacctcgtcgcggtcgagctgctcgatccgcaggaggtgtggcagaccaagcgc
gaaaaggtcgacaagaagaagcgcaaggaagagagcagtggcgccgatgcgcccgcggcg
ctcaccgcgcccgtgagcagccggcggccagacaaggcgcgcgacgacatggaagtcgag
ggcgcgcagctcgggctgatcgaggacgaggaggagagcgagctctctccgccggcgctc
gccggccacgtcgtggcgatcgtcgagcgcatgcccggccagatcttcccgggcaccctg
gcgctgctgcgccccagcagcgccgccacaaaagaaaagcagcaggctgagcgcagcgcg
agcggctccgctgcgccccccgacgacgacgccggcgcgccgcgccccaagatcgtgtgg
ttccgtcctacggacaagcgcgtgccgctcgtcgcgattcccgcggaccaggcgcccgcg
gacttttgggacgagaagcggcaggaggtgtacagccggacgctctttgtcgcgtgcatc
aagcggtggccgatctcgtcgctgcacccgttcggcgcgctcgttgaccagctcgggccg
atcggctcgctggcggccgagtcgcaggcgctgctgcgcgcgcagtgccagagccacacg
acgccgttcagcgacgcggcgctgcacagcgtgccgggcagcacatggacgatcccgccg
gccgagcgcgcgcgccgcacgttcactgcgtttacgctccgcgcgcgcggcccccgcgag
ctcgcgttttccgtggacgccgatggcgctaccctcacgctcggcgtgcacgccgcggac
attgcgcactttgtgccgtccggctccgcgctcgaccgcgaggcgcgccgccgcggcgcg
tcggtcgcccaggtcgaccagctgcacgacatgttcccgcccagcctgctcgcgcatgtg
gcgctgcaccccgcgcgcgaggcgctcacgcagtcggtcgtcttcaccgtggagcacggc
gccgtaacgcgcgtgtggatcggccgcagcctcgtgcggatcgccgaggacgtcgacgcc
gatgcgctggacgcggcgctcgccgcgcctgccgagggcgtcctcgctgcgctcccggcg
gcgcacgcgctgctggcgcgctggcggtccgagcgcgtggcgcgcggcgccctgctgctc
ccgcgctcggcnccggcgcagctgccgcgcgcggtgcagacgctcccggcggcggcgtgg
ccggcggcggccgcgctgctcgcgcaggcgctcccggcgccgaagctgtacgtgccgggg
ctcgtggacatggcgcagttctcgcactattcgctggcggagccgctctacacgctcttt
acgtcgcccctgcagcgctttgcggacgtgcaggtgcatcggcagctggacggcgtcacg
cagggcgtgctgggcgagcaggacgcggaggccgtcgcgaagctggcgcagcagtgccag
gtcaagctgcgcgcggcgcgtgtggcggagagccagagccagcacctgtacctgtgcgac
tggctcgcgcgcacgtcggtcgacacgctggcgccacgcgaggcgctggtgatcgcggtg
cacgcgacgtcgttcgacgtgcgcgtgccgtcgctcgcggtcgagaagcgcgtgcacctc
gactgcctgcccctcgacgcggcgcactgggacgagccgagccgtgcgctgacgctgcag
tggcgcgcgggcgtgcatcccatcgcgtggctggcgcaggccatcgacgatgcggcgtgt
gcgcggctgtgggccacgcacggcgcgcgcctcgtgctggcgtccggcagcgcgcagcgc
attgcgccgctcacgcgccttgccgtgtatgtgttggccgacatggacaagagcccaccg
atcctcaaggtggtgcgtgtgcccccctccggcctgtag
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