Methanosarcina siciliae HI350: MSSIH_0988
Help
Entry
MSSIH_0988 CDS
T03864
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSSIH_0988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msz03400
]
MSSIH_0988
Enzymes [BR:
msz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSSIH_0988
DNA repair and recombination proteins [BR:
msz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSSIH_0988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AKB31678
UniProt:
A0A0E3PD88
LinkDB
All DBs
Position
complement(1213740..1214588)
Genome browser
AA seq
282 aa
AA seq
DB search
MYRLKPELFNLDYTLDCGQVFRWEKSGDWWTGVVGDHVIRVLQDEDSGDLLVDSRLPPEF
FSHYFRLDDNLPSIYESINKDLLINRAINKYNGLRLIRQDPWECLISYMLATASSIPTIQ
KRIYLLSKIFGQELEEGYFSFPDPDTLAEADLSLLDKCKLGFRTERIKEAARGVASGELN
LNVLYRLEYRYSRERLMRLRGIGEKVADCVLLFAFEKMEAFPVDTHVRQIIQHYHIDDSY
FETCTNLSCMGEWGREYFGYYCGYAQQYLFYQKRLEGFVSLY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggcttaagcccgaacttttcaacctggactatacccttgactgcggacaggtc
ttccgctgggaaaagtcaggagactggtggacaggcgttgtaggagaccatgttatccgg
gttttgcaggacgaagacagtggagatctgctggtcgattcccgactgcctcccgaattt
ttctctcattatttccgcctggacgacaacctgccttcgatctacgaaagcataaacaaa
gacctcctgataaacagggcgattaacaaatacaacgggcttcgccttatcaggcaggac
ccctgggaatgcctgatttcttatatgcttgcaacagcttcaagcatccccacaattcag
aaaaggatatatctcctgagcaaaattttcggtcaggaactcgaagaagggtatttcagt
tttcctgaccccgatacccttgcagaagccgacctttccctgcttgacaaatgcaagctc
ggcttccgaaccgaacgcataaaagaagcagcaagaggtgtggcttctggcgaacttaac
cttaatgtcctctaccgcctggaatacaggtactccagggaacgcctcatgaggcttcgc
ggcatcggggaaaaagttgccgactgcgtcctccttttcgcctttgagaaaatggaagcc
ttccctgttgacacacatgtcaggcagatcattcagcattaccatatcgatgacagctac
tttgaaacctgcacaaacctgagctgtatgggagaatggggacgggaatacttcggctat
tactgcgggtatgctcagcagtatttgttttatcagaaaaggctggagggttttgtttcg
ctgtattaa
DBGET
integrated database retrieval system
