Methylocaldum szegediense: MSZNOR_3115
Help
Entry
MSZNOR_3115 CDS
T09668
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msze03032
]
MSZNOR_3115 (gyrB)
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_3115 (gyrB)
Enzymes [BR:
msze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSZNOR_3115 (gyrB)
DNA replication proteins [BR:
msze03032
]
Prokaryotic type
DNA Topoisomerases
MSZNOR_3115 (gyrB)
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSZNOR_3115 (gyrB)
BRITE hierarchy
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1
Motif
Other DBs
NCBI-ProteinID:
CAI8884044
LinkDB
All DBs
Position
MSZNORmain:complement(3002666..3005089)
Genome browser
AA seq
807 aa
AA seq
DB search
MSMTKLAKDYDSTAIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGH
CKTIRVIIHSDESVTVADDGRGIPVDIHEEEGRSAAEVIMTVLHAGGKFDDNVYKVSGGL
HGVGVSVVNALSEHLILEIKRGGKRYRQEYRDGEPLAPLAQIGDADGTGTTIRFKPSPAI
FSNIEFHYDILAKRLRELSFLNSGVRITLEDERTAKTDVFEFEGGIRAFVEHLNKNKTPL
FDKVFYFQTEKDGMVVEVAMQWNDSYQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNQY
IEEQGLLKKQKIPTSGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPVVESAMGEK
FQEFLLENPSIARLIANKMIDAARAREAARKAREMTRRKNALDIAGLPGKLADCQERDPT
LSELFIVEGDSAGGSAKQGRDRRTQAILPLKGKILNVERARFDKMLSSEEVGTLITALGC
GIGREEYDPNKLRYHRIIIMTDADIDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYK
VKKGKQEHYVKDDAELNEYLLQLALEKTRLHIDETTPPIQGQGLEQLAREYLTIQSLIQR
LAHRYDETLLNTLLEHPVLDATAMSDPKATEAWFAALVDRLNSTDRSASFAIDLDFTHQP
DGFRAHVSRRLHGVHKTFDINAAFFNGGDYKRLASFNQKVEGLFGEHSFLAWEDKKERVR
NFKQAFGWMMTEAKKGQHIQRYKGLGEMNPEQLWETTLDSNTRRLLQVKIEDAIAADEVF
STLMGDQVEPRRDFIEKNALEVANLDI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaccaaactcgctaaagattatgacagcaccgccatcaaggtcctgaagggg
ctcgatgccgtccgtaagcgcccgggtatgtatatcggtgatactgacgacggctcgggc
cttcatcacatggtcttcgaggttgtcgataattctatcgatgaggctctggccgggcac
tgcaagacgatccgagtcattattcacagcgacgaatcagtaaccgtcgccgatgacggc
cgcggaattccggtcgatattcacgaagaagagggccgttccgccgccgaggtcatcatg
accgttttacacgcggggggcaaattcgacgataacgtctataaggtttccggcggactt
cacggcgttggcgtctcggttgtgaatgccctatccgaacatttgatactcgaaattaaa
cgcggcggaaaacgttatcggcaagagtaccgcgacggcgagcccttggcaccccttgcg
cagatcggcgacgcggacggaaccgggacgaccatccgcttcaaacccagccccgctatc
tttagcaatatcgagtttcattacgacattctcgccaagcgtctccgcgaactgtcgttc
ctaaattctggtgttcgcataacgcttgaggacgaacgtactgcgaaaactgatgtcttc
gagttcgagggaggcatccgggcttttgtcgaacatctgaacaagaacaagactcccttg
ttcgacaaggtcttttacttccagacggagaaggacggcatggtggtcgaggtcgccatg
cagtggaacgattcgtatcaagagaacatcttctgtttcactaataatattccgcaacgc
gatggaggcacccatctggccggtttccgcgccgcgcttacccgcacgctcaatcaatac
atcgaagaacagggcttgttgaaaaagcagaaaatcccaacctcgggcgatgatgctcgt
gaaggcttaaccgcggtcctctcggtcaaggttcccgacccgaagttttcgtctcagacc
aaagacaagctcgtctcctctgaggtaaagcctgtcgtggagtcggccatgggggaaaaa
tttcaagagtttctcctggaaaacccctcgatcgcccgtctcatcgcaaacaagatgatc
gatgccgcccgtgcccgggaggcggcccgcaaggcgcgagaaatgacccgacggaagaac
gccttggacatcgccgggttgcctggcaagctggcggattgccaggaacgcgatccgact
ttgtcagagctgttcatcgtagagggcgattccgccggcgggtcggccaaacaaggccgc
gatcggcgcactcaagcgatacttcccctcaaaggtaagattctcaacgtcgagcgggcc
cggttcgacaagatgctgtcctccgaagaagtcggcacgctcatcactgcccttggctgc
ggaattggccgggaagaatacgatccgaacaagttacgctaccatcgcatcatcatcatg
accgatgccgatatcgacggttcgcacatccgtacgctgcttttgaccttcttctatcgg
cagatgcccgagctaatcgagcgcggccacatctatatcgcccagccgccgctttacaaa
gtcaagaaaggcaagcaggaacattacgttaaggatgacgccgaactcaatgaatatcta
ttgcagcttgcactcgaaaaaacccgtcttcacatcgacgaaaccacgcccccgatccag
ggtcagggactcgagcaacttgcacgggaatatttgaccatccagtccctgattcaacgt
ctcgctcatcgctacgacgagactttgctaaacacgctcctcgaacatccggtcctcgat
gctaccgcgatgagcgatccgaaggcgaccgaagcctggttcgcggctttggtcgatcgg
ttaaacagcactgaccgcagtgcaagctttgccatcgacttggattttactcaccagccc
gacggctttcgggcccatgtcagtaggcgcttgcacggagttcataagaccttcgacatc
aacgctgcattcttcaacgggggcgattataaacgtctggcctccttcaaccagaaagtc
gagggtcttttcggcgagcactccttcctagcatgggaggataaaaaggaacgggtaagg
aacttcaaacaggctttcggatggatgatgacggaggcgaagaagggacagcatatccag
cgctataaagggctcggcgagatgaatccggagcagttatgggaaacgactttggattcg
aacacgcgccgcttgttacaggtgaaaatcgaggacgctatagccgccgatgaagtcttt
tccaccctgatgggcgatcaggttgagcccagacgggatttcatcgagaaaaacgctttg
gaagtcgccaacctggacatttga
DBGET
integrated database retrieval system
