Microbacterium terricola: OAU46_10945
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Entry
OAU46_10945 CDS
T08704
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mtec
Microbacterium terricola
Pathway
mtec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OAU46_10945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtec03019
]
OAU46_10945
03009 Ribosome biogenesis [BR:
mtec03009
]
OAU46_10945
Enzymes [BR:
mtec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OAU46_10945
Messenger RNA biogenesis [BR:
mtec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OAU46_10945
Ribosome biogenesis [BR:
mtec03009
]
Prokaryotic type
rRNA helicases
OAU46_10945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
UYK39211
LinkDB
All DBs
Position
2265696..2267471
Genome browser
AA seq
591 aa
AA seq
DB search
MTETDAPTEAEAPSEPAALTFSDLGLGDAVLKALRDVGYETPSAIQAATIPTLLAGRDVV
GLAQTGTGKTAAFALPVLDRLDLSQKTPQALVLAPTRELALQVCEAFEKYAAHLRGVHIL
PVYGGQGYGVQLSALRRGVHIIVGTPGRIMDHLDKGTLDLSELKYLVLDEADEMLKMGFA
EDVETILADTPDTKQVALFSATMPATIRRMSKQYLNDPEEITVKTKTTTSASISQRYLVV
QWQQKIDALTRILEVENFEGMIVFARTKSATEEVAEKLRARGYSAAAINGDIAQVQRERT
VNQLKSGKLDILVATDVAARGLDVERISHVVNFDIPTDTESYVHRIGRTGRAGRTGDAIS
FVTPRERNLVSSIERATRQPLTQMQLPSVDEVNVTRLARFDDRITAALGESARIDRFRDI
VAHYVRNHDVPEVDVAAALAVVAQGESPLLLDAEPDRPKREFADRPDRGDRPGRFDRDDR
DGQRERRQRPSNPNMATYRIAVGKRHRVEPRQIVGALANEGGLSRGDFGAIQIRPDFSLV
ELPSNLSSDTLARLSDTRISGQLIEIRLDTGGPSRRPRDDDRPPRKPRHRD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccgacgcgcccaccgaggcagaggctccgagcgagcccgccgccctcaca
ttctccgacctcggattgggcgacgcggtgctgaaggcgctccgcgacgtcgggtacgag
acgccgtcggccatccaggccgcgacgatccccaccctcctcgccggccgcgacgtcgtg
ggcctcgcgcagacgggcacgggcaagaccgccgcgttcgcactgcccgtcctcgaccgg
ctcgacctgtcgcagaagaccccgcaggcgctggtgctggcgccgacgcgcgagctggcg
ctccaggtctgcgaggccttcgagaagtacgccgcccacctgcgcggcgtgcacatcctc
cccgtctacggcgggcagggctacggcgtgcagctgtcggctctccgtcgcggcgtgcac
atcatcgtgggcacgcccggccgcatcatggaccacctcgacaagggcacgctcgacctg
tcggagctgaagtacctcgtgctcgacgaggccgacgagatgctcaagatgggcttcgcg
gaagacgtcgagacgatcctcgccgacacccccgacaccaagcaggtcgccctcttctcg
gcgaccatgcccgcgacgatccgccgcatgtcgaagcagtacctgaacgacccggaagag
atcacggtcaagaccaagaccacgacctccgcgtcgatctcgcagcgttacctcgtcgtg
cagtggcagcagaagatcgacgcgctcacccgcatcctcgaggtggagaacttcgagggc
atgatcgtgttcgcccgcacgaagagcgccaccgaggaagtggccgagaagctccgcgct
cgcggctactcggccgccgccatcaacggcgacatcgcccaggtgcagcgcgagcgcacg
gtcaaccagctcaagtcgggcaagctcgacatcctggtcgcgaccgacgtcgccgcccgc
ggtctcgacgtcgagcgcatctcgcacgtggtcaacttcgacatcccgaccgacaccgag
tcgtatgtgcaccgtatcggccgcaccggccgggccggccgcaccggcgacgcgatcagc
ttcgtgaccccacgcgagcgcaacctcgtctcgtcgatcgagcgggcgacccgccagccc
ctcacccagatgcagctcccgagcgtcgacgaggtcaacgtcacccgtctggcccgcttc
gacgaccggatcaccgcggcgctcggcgaatccgcgcgcatcgaccggttccgcgacatc
gtcgcgcactacgtccgcaaccacgacgtgccggaggtcgatgtggccgcagcgctcgcc
gtggtcgcccagggcgagtcgccgctgctgctcgacgccgagcccgaccgtccgaagcgc
gagttcgccgaccggcccgaccggggcgaccgccccggccgcttcgaccgtgacgaccgc
gacgggcagcgcgagcgacgccagcgccccagcaacccgaacatggcgacgtaccgcatc
gccgtcggcaagcgccaccgcgtcgagccgcgccagatcgtcggcgcactcgcgaacgag
ggtggactcagccgcggcgacttcggcgcgatccagatccgaccggacttctcgctcgtc
gagctgccgtcgaacctgtcgagcgacaccctcgcccggctgtccgacacccgcatctcc
ggtcagctcatcgagatccgactggacaccggcggcccgtcccgccgcccgcgcgacgac
gaccgcccgccccgcaagccccgccaccgcgactga
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