KEGG   Methanothermobacter thermautotrophicus: MTH_1580
Entry
MTH_1580          CDS       T00009                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mth  Methanothermobacter thermautotrophicus
Pathway
mth03030  DNA replication
mth03410  Base excision repair
mth03420  Nucleotide excision repair
mth03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MTH_1580
   03410 Base excision repair
    MTH_1580
   03420 Nucleotide excision repair
    MTH_1580
   03430 Mismatch repair
    MTH_1580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mth03032]
    MTH_1580
   03400 DNA repair and recombination proteins [BR:mth03400]
    MTH_1580
Enzymes [BR:mth01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MTH_1580
    6.5.1.6  DNA ligase (ATP or NAD+)
     MTH_1580
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MTH_1580
DNA replication proteins [BR:mth03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MTH_1580
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MTH_1580
DNA repair and recombination proteins [BR:mth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MTH_1580
   NER (nucleotide excision repair)
    Other NER factors
     MTH_1580
   MMR (mismatch excision repair)
    Other MMR factors
     MTH_1580
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AAB86053
UniProt: Q50566
LinkDB
Position
1446239..1447924
AA seq 561 aa
MKELLYMELAEVYHRLESTTKRLEKTEILAELLRSVDKELLPDVTILMLGRVFPIWSEEE
LGVGIKLLMKAISLVVGVSMDEIEDEIREQGDIGLASEKLFSRKTQTTFFSQPLTVEFVY
SRLKALASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAIAR
AFEVDPALVERAHMLTNDLGMVAAVAREEGEPGLGRLNLEPGRPVKPMLAQLASSIESAI
TELGRAFCETKYDGIRVQIHRCGDEISIFTRRLENITAAVPEILEGVEEALPADDYIVEG
EIIVTMDGRPASFQYILQRVRRKYDVERLTREVPLSLFLFDVLYHREPLIDEPLRHRREV
LESILSEIPGRVEASRMVDVGPDNLNDALWLFEESIREGHEGIMIKDTEAPYIPGIRGKK
MLKFKAEPETLDLIVVGGTYGRGKRAHLVGSYLLAARDEDSGDLVTVAHVATGLDDETLQ
QLSERMEKLAIERKGRKLLVRPEIILEVAYSEIVKSPEYESGYSLRFPVVKRIRDDLCLD
DVDTVGRIESLFQSGQPDQPG
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgaaggaattgctctatatggaacttgcagaggtataccacagacttgaatcaaccaca
aaacgccttgaaaagactgaaatacttgcggaactcctgaggagtgttgataaggaactt
ctgcccgatgtaacaatactgatgcttggcagggtgtttccaatctggagtgaggaggaa
cttggggttggcataaagctgctcatgaaggcaatatccctggttgtgggggtttcgatg
gatgaaatcgaggacgaaataagggaacagggtgatataggccttgcaagtgaaaaacta
ttctccagaaaaactcaaacaacctttttttcacaacccctgacagtggaatttgtttac
agcagactgaaggccctggcatcagcttctggtgatagggcacagtcaaagaagataaac
atacttgttgaggtcctgtcccaggcaaagccactggaggcacgctatataacaaggacg
gtccttgaggaactgagggttggtgttgcagagggaatcataagggacgccattgcccgg
gcctttgaggttgacccggcactcgttgaaagggcccacatgctcacaaatgacctggga
atggtggccgcagttgcaagggaggagggcgagcctggacttggaagactcaaccttgaa
ccgggaagacccgtgaaaccaatgctggcacagcttgccagcagcatagaatctgccata
acggagcttggaagggccttctgtgaaaccaaatatgatggtatacgtgttcagatacac
agatgcggggatgagatatccatcttcaccaggagacttgagaacatcaccgcggcggtc
cccgagatacttgagggtgttgaggaggcccttccagccgatgactacatagttgagggg
gaaataatagtcaccatggatgggaggccagcctccttccagtacatactccagcgtgtc
agaagaaaatatgatgtggagagacttacaagggaggttcccctctcactgttcctcttt
gatgtcctctaccacagagaacccctcatcgatgaacccctccggcacagaagggaggtc
cttgagtcaatactctcagaaatacctggaagggttgaggcgagtcgcatggttgatgtg
ggcccggataacctgaatgatgctctatggctcttcgaggagtcaataagagagggacat
gagggtataatgataaaggatacggaggcgccgtatataccgggtataaggggtaaaaag
atgcttaagtttaaggcagaaccagagaccctggacctcattgtggtcggtggcacctat
ggcaggggtaaaagggcacatctggtgggatcctatctcctggcagccagggatgaggat
agcggggaccttgttacggttgcacatgttgcaacggggcttgacgatgagacgctccag
caactctcagagaggatggaaaaacttgccattgagaggaagggacggaaactcttggtc
aggccagaaataatacttgaggtcgcctacagtgagatagtgaagagtcctgagtatgaa
agcggttactccctgcgttttccagtggtgaaacgtataagggacgatctgtgcctggac
gatgttgatacagttggacgtatagagtccctcttccagtccggacagccagaccaacca
ggttag

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