Macaca thibetana thibetana (Pere David's macaque): 126947643
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Entry
126947643 CDS
T08579
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mthb04121
]
126947643
Enzymes [BR:
mthb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126947643
Ubiquitin system [BR:
mthb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
126947643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Sina_ZnF
zf-TRAF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
Tricorn_PDZ
CEP104_ZnF
zf-RING_6
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
126947643
NCBI-ProteinID:
XP_050634511
LinkDB
All DBs
Position
2:complement(127728926..127968959)
Genome browser
AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPAHCRGRL
SAKELNHVLPLKRLILKLDIKCAYAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDTGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSAT
PYGLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RAAEGISCPSTEGAVATTEAYGPAPKNLLSITEDPEVGTPTYSPSLKELDPSQPLESKER
RASDGSRSPTPSQKLGSAYLPTYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacttgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcactgccgcggtcgccta
tcggccaaagagctcaaccacgtcctaccgctcaagcgccttatcctcaagctggacatc
aagtgcgcctacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccttgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctgcaggcccgcttgggcgctctg
cacaaggcgctcaagaaggaggcgctgcgcgctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggcgaagaaaccaaaagcctgactcttgtcctgcatcgggactctggctccctggga
ttcaatattattggtggccggccgagtgtggataaccacgatggatcatccagtgaagga
atctttgtatccaagatagttgacactgggcccgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttgtccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatagtggtgcaggtgttgagaagaacacca
aggaccaaaatgttcacgcctccatcagagtcgcaactggtggacacgggaacccaaacc
gacatcacctttgaacatatcatggccctcactaagatgtcctctcccagcccgcccgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactacgatccaaat
gactacattggagacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggacagac
gatgaagatgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcataatccagatcaatgggatagaggtgcagaac
cgagaagaggctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgatt
gcaaggcctgaactccagctggatgagggctggatggacgatgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcaattcacagct
agcgtgcttcagcagaagaagcacgaggaagacggtgggaccacagatacagccaccatc
ttgtccaaccagcacgagaaggacagcggtgtggggcggaccgacgagagcacccgcaat
gacgagagctcggagcaagagaacaacggcgacgatgccaccgcatcctccaacccgctg
gcggggcagaggaagctaacctgcagccaggacaccttgggcagtggcgacctacccttc
agcaacgagtccttcatctcggccgactgcacggacgccgactacctggggatcccagtg
gacgagtgcgagcgcttccgtgagctcctggagctcaagtgccaggtgaagagcgccact
ccttatggcttgtactaccctagcggccccctggacgccggcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctcaaggaacagtaccgcgagtcctggatg
ctacataacagcggcttccgcaactacaacaccagcattgacgtgcgtaggcacgagctc
tcggacatcaccgagctcccggagaaatccgacaaggacagctcgagcgcctacaacacg
ggcgagagctgccgcagtaccccgctcaccctggagatctcccccgacaactccttgagg
agagcagcggagggcatcagctgcccgagcaccgaaggggctgtggcgaccacggaagcc
tatgggccagccccaaagaatctgctctccatcacggaagatcccgaagtgggcacccct
acctatagcccatccctgaaggagctggaccctagccagcccctggaaagcaaagagcgg
agagccagcgacgggagccggagccccacgcccagccagaagctgggcagcgcctacctg
cccacctaccaccactccccatacaagcacgcacacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatg
agcctggtgagcatgtgcaaggacctgagctcccccaccccgtcggagccgcgcatggag
tggaaggtgaagattcgcagcgacgggacgcgctacatcaccaagaggcccgtgcgggac
cgcctgctgcgggagcgcgccctgaagatccgggaagagcgcagcggcatgaccaccgac
gacgacgcggtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcag
cacttggtgaaggccaaggagcagcggcggcggcgcgagttcatgatgcagagcaggttg
gattgtctcaaggagcagcaagcagccgacgacaggaaggagatgaacatcctcgaacta
agccacaaaaagatgatgaagaagaggaataaaaaaatcttcgataactggatgacgatc
caggaactcttaacccacggcacaaaatccccggacggcactagagtatacaattccttc
ctatcggtgactactgtataa
DBGET
integrated database retrieval system
