Mixta theicola: C7M52_03778
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Entry
C7M52_03778 CDS
T06402
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mthi
Mixta theicola
Pathway
mthi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M52_03778 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthi03019
]
C7M52_03778 (rhlB)
Enzymes [BR:
mthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7M52_03778 (rhlB)
Messenger RNA biogenesis [BR:
mthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7M52_03778 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHM77768
LinkDB
All DBs
Position
complement(4184637..4185929)
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEKKFSDFALHPQVIEALEKKGFHNCTPIQALALPLTLVGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAAEGRQVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPATSQRLNMLFSATLSYRVRELAFEHMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTQGNLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGSSISLA
CEEYALNLPAIEEYIGHGIPVSKYNSEALMNDLPPPKRLTRNRPSNGPRRSTGNNRRSGA
PRNTNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaaccgaaaagaagttttccgacttcgccctgcacccacaagtt
atcgaagcccttgaaaagaaaggcttccataattgtacgcctattcaggcgttagcattg
ccgctcacgctggtcgggcgcgatgttgcgggtcaggcgcaaaccggaacaggcaaaacg
atggcgtttctgacgtcgacgtttcattatttgctttcccatcccgccgcagaaggccgc
caggttaatcaaccgcgcgcgctgattatggcccccacccgcgagctggccgtacagatc
catgccgacgccgagccgttagcacaggcgaccggcctgaagctgggtctggcttatggc
ggcgacggttatgacaaacagctgaaagtgctggaaagcggcgtggatatcctgatcggc
accaccgggcgtctgatcgactacgctaaacagaatcatatcaaccttggcgcgattcag
gtggtggtgctggatgaggccgatcgtatgttcgatctcggctttatcaaagatatccgc
tggctgttccgccgtatgccggccaccagccagcgtctgaatatgctgttctccgccacg
ctctcttaccgcgtccgcgagctggcgttcgaacatatgaacaatgccgaatatatcgag
gttgaaccggaacagaaaaccggccaccgcattaaagaagagctgttctacccttctaac
gaagaaaagatgcgcctgctgcagacgctgattgaagaagaatggccggatcgcgcgatt
attttcgccaataccaaacatcgctgcgaggatatctggggccacctggccgccgacggc
catcgcgttgggctgttaaccggcgacgtggcgcagaaaaaacgcctgcggattctggaa
gatttcacccagggcaaccttgatattctggtcgctaccgacgtggcggcgcgcgggctg
catattccggcggtgacgcacgtctttaactacgatctgcctgacgactgcgaagactat
gttcaccgtatcggccgtaccggccgcgccggcgccagcggctcctcgatcagccttgcc
tgtgaagagtacgcgctgaatctgccagcgatcgaagaatatatcggtcacggcattccg
gttagtaaatacaacagcgaagcgctgatgaacgatctgccgccgccgaaacggctgacg
cgtaatcgccccagcaacggcccgcgccgttccacgggcaataaccgtcgcagcggcgcg
ccgcgtaatactaaccgtaaacgatcaggttaa
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