KEGG   Methanothermobacter sp. THM-1: FZP57_00530
Entry
FZP57_00530       CDS       T06420                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mthm  Methanothermobacter sp. THM-1
Pathway
mthm03030  DNA replication
mthm03410  Base excision repair
mthm03420  Nucleotide excision repair
mthm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mthm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FZP57_00530
   03410 Base excision repair
    FZP57_00530
   03420 Nucleotide excision repair
    FZP57_00530
   03430 Mismatch repair
    FZP57_00530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthm03032]
    FZP57_00530
   03400 DNA repair and recombination proteins [BR:mthm03400]
    FZP57_00530
Enzymes [BR:mthm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FZP57_00530
    6.5.1.6  DNA ligase (ATP or NAD+)
     FZP57_00530
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     FZP57_00530
DNA replication proteins [BR:mthm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FZP57_00530
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     FZP57_00530
DNA repair and recombination proteins [BR:mthm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FZP57_00530
   NER (nucleotide excision repair)
    Other NER factors
     FZP57_00530
   MMR (mismatch excision repair)
    Other MMR factors
     FZP57_00530
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QHN05718
UniProt: A0A6B9TDW9
LinkDB
Position
110113..111774
AA seq 553 aa
MLYMDLARVYKALESTTKRLEKTEILAELFRSVEGELLPAVTILMLGRVFPTWSSEELGV
GIKLLMKAISTVVGVSVEEIEDEIREQGDIGLASEKLFSRKAQTTFFSKPLTVELVYSKL
RALASISGERAQSRKIDILLEILSQAKPLEAKYITRTVLEELRVGVAEGIIRDAISGAFG
VDPALVERAHMLTNDLGMVALVARDEGEEGLKKLNLEPGRPVKPMLAQLADSIESAVQEL
GRAFCETKYDGVRVQIHRKSGEILIFTRRLENITLAVPDIVEMVEEALPDTDYIFEGEII
VKIDGRPASFQYILQRVRRKYDIDRLKVEVPLSLYVFDVLYHERPLIDEPLIKRRSILES
VISEIPGKVEASHMVDVGPDNVEDAVNLFNESIREGHEGIMIKDVMAPYIPGIRGKKMLK
FKAEPETLDLVVVGGTYGRGKRAHLVGSYLLAARDEDTGELMTVAHVATGLDDQTLQELS
DRMEELIIERKGRKLWVKPEIVLEVAYSEIVKSPEYESGYSLRFPVVKRIRDDLSPEDVD
TVSRIRSIFGESE
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgctctacatggaccttgcaagggtttataaagccctggaatcaacaacaaagcgcctt
gagaagacagagatcctcgcggaactcttcaggagtgttgaaggagaacttttacctgca
gtaaccatcctcatgctggggagggttttcccgacatggagctctgaagagctcggtgta
ggcataaagctcctcatgaaggcaatctccactgttgtgggtgtttcagttgaggagatc
gaggatgaaataagggaacagggagacataggccttgcaagtgaaaaactcttttcaaga
aaggcccagacaacatttttttcaaagccactaacggttgaactggtctacagtaaactg
agggccctcgcatccatatccggtgagagggcgcagtcaaggaagatagacatactcctt
gagatactctcacaggcaaagccccttgaggcaaagtacattacaaggactgttcttgag
gaactgagggttggagttgcagagggaataataagggatgccatatcaggggctttcggt
gttgaccctgccctggtggaaagggcccatatgctcaccaatgaccttggaatggttgcc
ctggttgcaagggatgaaggagaggagggccttaagaaacttaacctggagccagggaga
cctgttaaacccatgcttgcacagcttgcagatagcattgaatcagcggtccaggaactt
ggaagggccttctgtgaaacaaaatatgatggtgtgagggtacagatacacagaaaatca
ggcgaaatacttatattcacaaggagacttgagaatatcaccctggcggtccctgacatt
gttgagatggttgaggaggcactgccagacactgattacatctttgagggtgagataata
gtgaaaattgacggcagacctgcatccttccagtacatacttcagagggtccgccgtaag
tatgatatagacaggctgaaggttgaggttccactctcactgtacgtatttgacgtccta
taccatgaaagacccctcatcgatgagcccctgataaagaggaggagtatactggagtct
gttatctctgaaatccccggaaaggttgaggcaagccacatggttgatgtggggcctgat
aatgttgaagacgcggttaatctcttcaatgagtcaataagggagggccatgagggtata
atgataaaggacgttatggcaccctacataccgggtatacgcggcaaaaaaatgctgaaa
tttaaggcggaacccgagaccctggaccttgttgtggttggaggcacctatgggcgcggt
aaaagggctcaccttgtgggttcgtatctcctggcagcaagggatgaggataccggggag
ctaatgaccgtggcacatgttgcaaccggccttgatgatcagacccttcaggagctttca
gacaggatggaggagctgataattgagaggaagggccggaagctgtgggttaaaccggag
atagtactggaggttgcctacagtgagatcgtaaagagccctgaatatgagagcggatat
tcactgaggttccctgtagtgaagcgtataagggatgatctgagccctgaggacgttgat
acggtctcccgtatcaggtcaatttttggggagtctgaatga

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