Mycolicibacterium thermoresistibile: 4412656_00830
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Entry
4412656_00830 CDS
T05542
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
4412656_00830 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_00830 (recD)
Enzymes [BR:
mthn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
4412656_00830 (recD)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
4412656_00830 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
Helicase_RecD
AAA_22
UvrD-helicase
SH3_13
AAA_16
AAA_28
nSTAND3
AAA_5
TrwB_AAD_bind
T2SSE
AAA
dCache_3
NTPase_1
RecD_N
Mg_chelatase
SRP54
Herpes_Helicase
NACHT
ATPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
SNW17030
LinkDB
All DBs
Position
1:complement(908518..910251)
Genome browser
AA seq
577 aa
AA seq
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MSAPTEIDALSWRFPVGADGLLREFAEAGVIETADVQVARRLCELGGEPDERVALAVALV
VRALRGGSVCVDLSAVAGQIGRPELPWPSPSAWLDAVAASPLVTASALRVDGRLVYLDRY
WREEQQVCEDVLTLVTARPPGTAPASERLFPAGYEEQRAAADVALSQGLTVLTGGPGTGK
TTTVARLLALIAEQAAAAGRPPLRIALSAPTGKAAARLQEAVQLEVDRLDLVDRRRLSGL
QATTLHRLLGPRPDSSSRFRHHRANRLPHDVIVVDETSMVSLTMMARLLEAVRPDARVLL
VGDPDQLASVEAGAVLADLVDGLSARSDTRVAALLTSHRFGESIGALAAAIRAGDADAVV
EVLRAGGEHIEWVDTEEPAEALRAVVEPHALRLRQAAVLGDRDRALAALDEHRLLCAHRR
GPYGVTYWNRQTERWLSEATGEPIWSAWYVGRPVLVTANDYGLRLYNGDTGVTVAGDDGL
RAVIAGAAGRVEFATSRLSEVDTMHAMTIHKSQGSQADEVTVLLPPEDSRLLSRELFYTA
VTRAKSRVRIVGPEASLRQAVRHRVVRASGLARRLSA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcccaccgagatcgatgcgctgtcgtggcggttcccggtcggggccgacgga
ctgctgcgggagttcgccgaggccggcgtgatcgagaccgccgatgtacaggtggcgcgg
cggttgtgcgagctcggcggggaacccgacgagcgggtggcgctggccgtggcgttggtg
gtgcgggcgttgcgcggcgggtcggtgtgtgtggacctgtcggcggtggccgggcagatc
gggaggcccgagctgccgtggccgtcgccgtcggcgtggctggacgccgtggcggccagc
ccgctggtcaccgcgtcggcgctgcgggtcgacggccggctggtgtatctggaccggtac
tggcgggaggaacagcaggtctgtgaggacgtgctgacgctggtcacggcgcggcccccg
ggcaccgcacccgcctccgagcgacttttcccggccggatacgaggaacagcgggccgcc
gcggatgtggccttgtcgcaggggctcacggtgctgaccggcgggccgggcaccggcaag
accaccacggtcgcgcggctgctggcgttgatcgccgagcaggccgcggcggcggggcgc
ccaccgctgcggatcgcgttgtcggcgccgacgggcaaggccgccgcccggttgcaggag
gcggtgcaactggaggtcgacaggctggacctggtggaccggcgccggctgtccgggttg
caggcgacgactctgcaccggctgctcgggccgcggccggattcgtcgtcgcggttccgg
catcaccgcgcgaaccggttgccgcatgacgtgatcgtggtggacgagacgtcgatggtg
tcgctgacgatgatggcgcggctgttggaggcggtccgcccggatgcgcgggtgctgctg
gtgggggatccggatcagttggcgtcggtggaagccggtgcggtgctggcggatctggtg
gacgggttgtcggcccgctcggacacccgggtggcggcgctgctgacgtcgcaccggttc
ggcgagtcgatcggggcgctggcggcggcgatccgggccggggacgccgatgcggtggtc
gaggtgttgcgcgccggcggtgagcacatcgagtgggtcgacaccgaggagccggccgag
gcgttgcgcgccgtggtggaaccgcatgcgctgcggctgcggcaggccgcggtgctgggc
gaccgggatcgggcgctggccgcgttggacgagcatcggctgttgtgcgcgcatcgccgc
ggcccgtacggggtgacgtattggaatcggcagaccgagcgctggttgtcggaggcgacc
ggcgagccgatctggtcggcctggtatgtcgggcggccggtgctggtgaccgccaacgat
tacgggctacgcctctacaacggtgacaccggggtgacggtggccggtgacgacgggctg
cgggcggtgatcgccggggcggccgggcgggtggagttcgccaccagccggctctccgag
gtggacaccatgcacgcgatgaccatccacaagagtcagggcagccaggccgacgaggtg
acggtgctgctgccgccggaggattcccggctgctgtcgcgggagctgttctacaccgcg
gtcacccgggcgaagtcgcgggtgcggatcgtcgggccggaggcgtcgctgcgtcaagcg
gtgcggcaccgggtggtgcgggccagcgggctggcccgccggctcagtgcgtga
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