Massilia oculi: DIR46_19220
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Entry
DIR46_19220 CDS
T05448
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mtim
Massilia oculi
Pathway
mtim00521
Streptomycin biosynthesis
mtim00523
Polyketide sugar unit biosynthesis
mtim00541
O-Antigen nucleotide sugar biosynthesis
mtim01100
Metabolic pathways
mtim01110
Biosynthesis of secondary metabolites
mtim01250
Biosynthesis of nucleotide sugars
Module
mtim_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DIR46_19220 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DIR46_19220 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DIR46_19220 (rfbC)
Enzymes [BR:
mtim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DIR46_19220 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AWL07797
UniProt:
A0A2S2DR15
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All DBs
Position
4259233..4259781
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AA seq
182 aa
AA seq
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MMEITRLAIPDVLRIVPRSFGDERGFFYESFRQDLFDAAVGRRVAFVQDNHSGSACNVLR
GLHYQVRQAQGKLVRVVSGSVFDVAVDLRRSSPTFGHWVGEVLSAENRAQMWVPEGFAHG
FIVLSASAETVYKATDYYAPEHERCIAWDDRHLAIGWPRTSAPVVSAKDRQGLPFAAAEL
FD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ctgatggagattacgcggctggcgatccccgacgtcttgcgcatcgttccccgttcattc
ggcgacgagcgcggcttcttctacgagagctttcgccaggatctcttcgatgcggcggtg
ggccgcagagtagcgtttgtccaggataaccattccggttcggcctgcaatgtgctgcgc
ggcctgcattaccaggtccggcaggcgcaaggcaagctggtgcgcgtcgtgagcggaagc
gtgttcgacgtggcggtcgatctgcgccgctcgtcgccaaccttcggccattgggtgggc
gaggtgctcagcgccgaaaaccgggcgcagatgtgggtgcccgaaggtttcgctcacggt
ttcatcgtgctgtccgccagcgccgagacggtctacaaggcgaccgactattatgcgccg
gagcacgagcgctgcatcgcctgggacgatcgccacctggcaatcgggtggccgcgcacg
tccgcgccggtcgtgtcggccaaggatcgccagggcctgccatttgcagcggccgaactg
ttcgactga
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