Mycobacterium tuberculosis KZN 4207: TBSG_00643
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Entry
TBSG_00643 CDS
T01690
Name
(GenBank) exonuclease subunit V beta recB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mtk
Mycobacterium tuberculosis KZN 4207
Pathway
mtk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TBSG_00643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtk03400
]
TBSG_00643
Enzymes [BR:
mtk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TBSG_00643
DNA repair and recombination proteins [BR:
mtk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TBSG_00643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB02772
LinkDB
All DBs
Position
complement(722039..725323)
Genome browser
AA seq
1094 aa
AA seq
DB search
MDRFELLGPLPREGTTTVLEASAGTGKTFALAGLVTRYLAETAATLDEMLLITFNRAASR
ELRERVRGQIVEAVGALQGDAPPSGELVEHLLRGSDAERAQKRSRLRDALANFDAATIAT
THEFCGSVLKSLGVAGDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALA
LALAVVDDPCAQLRPPDPEPGSKAAVRLRFAAEVLEELERRKGRLRAQGFNDLLIRLATA
LEAADSPARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHSALILIGDPKQAIYGFRG
GDIHTYLKAAGTADARYTLGVNWRSDRALVESLQTVLRDATLGHADIVVRGTDAHHAGHR
LASAPRPAPFRLRVVKRHTLGYDGTAHVPIEALRRHIPDDLAADVAALLASGATFAGRPV
VAADIAVIVEHHKDARACRNALAEAGIPAIYTGDTDVFASQAAKDWLCLLEAFDAPQRSG
LVRAAACTMFFGETAESLAAEGDALTDRVAGTLREWADHARHRGVAAVFQAAQLAGMGRR
VLSQRGGERDLTDLAHIAQLLHEAAHRERLGLPGLRDWLRRQAKAGAGPPEHNRRLDSDA
AAVQIMTVFVAKGLQFPIVYLPFAFNRNVRSDDILLYHDDGTRCLYIGGKDGGAQRRTVE
GLNRVEAAHDNLRLTYVALTRAQSQVVAWWAPTFDEVNGGLSRLLRGRRPGQSQVPDRCT
PRVTDEQAWAVFAQWEAAGGPSVEESVIGARSSLEKPVPVPGFEVRHFHRRIDTTWRRTS
YSDLVRGSEAVTVTSEPAAGGRADEVEIAVVAAPGSGADLTSPLAALPSGASFGSLVHAV
LETADPAAPDLAAELEAQVRRHAPWWTVDVDHAQLAPELARALLPMHDTPLGPAAAALTL
RQIGVRDRLRELDFEMPLAGGDLRGRSPDVSLADVGELLASHLPGDDPLSPYADRLGSAG
LGDQPLRGYLAGSIDVVLRLPGQRYLVVDYKTNHLGDTAADYGFERLTEAMLHSDYPLQA
LLYVVVLHRFLRWRQRDYAPARHLGGVLYLFVRGMCGAATPVTAGHPAGVFTWNPPTALV
VALSDLLDRGRLQS
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgagctgctgggcccgttgccgagggagggcaccaccaccgtgctggaa
gccagcgccggcaccggtaagacgttcgcgctggccggtctggtcacccgctatctggcc
gaaaccgccgcgacgctcgacgagatgttgttgatcacgttcaaccgtgcggccagccgg
gagttacgcgagcgagtgcgcgggcagatcgtcgaggccgtgggcgcgctacaaggcgac
gcgccgccgagcggcgagctcgtcgagcacctgctgcgcggcagcgacgccgagcgcgcc
cagaagcggtcgcggctgcgtgacgcgctggccaacttcgacgcggcaaccatcgccacc
acccacgagttctgcggctcggtgttgaaatccctcggtgtggccggtgacaacgccgcc
gacgtggagctcaaggagagccttaccgacctggtcactgagatcgtggacgatcgctat
ctggcgaacttcggtcgtcaggagaccgatccggagctgacctacgccgaggcgctggcc
ctggcccttgccgtcgtcgacgacccgtgcgcccaactgcgcccgcctgatcccgagccc
ggcagcaaggcagcggtgcggctgcgctttgccgccgaggtgctcgaggaactcgagcgc
cgcaagggccggctgcgtgcgcaaggattcaacgatctgctgatccgtttggcgacagcc
ctcgaggcggccgactcgccagctcgcgatcggatgcgggaacgctggcggatcgtgctg
gtggacgagtttcaagataccgaccccatgcagtggcgggtgctcgagcgcgcgtttagc
cggcattcggcgctgatcctgatcggcgatcccaagcaggcgatctacggctttcgcggc
ggcgacatccacacctacctcaaggcggccggcaccgccgatgcccgctacacgttgggc
gtcaactggcgcagcgaccgggcgctggtcgagagcctgcagacggtgctgcgcgatgcg
accctgggtcacgccgacatcgtcgtccgcggcaccgacgcccaccacgccgggcaccgc
ctggcctcggcgccgcgcccggcgccgtttcggttgcgcgtggtcaaacggcacacgctc
gggtatgacgggaccgcccacgtcccgatcgaggcgctgcgccggcacatccccgacgac
ctggccgccgacgtcgcggcgctactggccagcggggccaccttcgccgggcggcccgtg
gtggccgcagacatcgcggtgatcgtcgagcatcacaaagacgcgcgggcgtgccggaat
gcgttggcggaggcgggcatcccggcgatctacaccggtgacaccgacgtgttcgcctcg
caggccgccaaggactggctgtgcctgctggaggcgttcgacgcgccgcagcgcagcggg
ctggtccgcgccgccgcgtgcacgatgttcttcggtgagaccgcggaatcgcttgccgcc
gagggcgatgcgctgaccgatcgggtggccggcacgttgcgcgagtgggccgaccacgca
cgccatcgcggtgtggccgcggtgtttcaggccgctcagctggccgggatgggccggcgc
gtgctgagccagcgcggcggcgaacgggacctgacagacctggcgcacattgcgcagctg
ctgcacgaggccgctcatcgcgagcggctcggcctgcccgggctgcgcgattggctgcgc
cgccaggccaaggcgggtgccggcccgccggaacacaatcgccggttggacagcgacgcc
gcggcggtgcagatcatgaccgtcttcgtggccaagggactgcagtttcccatcgtgtat
ctgccgttcgccttcaaccgcaacgtccgcagcgacgacatcctgctgtatcacgacgac
ggcacccgctgcctgtacatcggcggcaaggacggcggtgctcagcggcgcaccgttgag
gggctgaaccgcgtcgaggcggcccacgacaacctccggctcacctatgtcgcgcttacc
cgcgcgcaatcgcaggtcgtcgcgtggtgggcaccgacgttcgacgaggtcaacggcggg
ttgtcgcggttgctgcgcgggcgccggcccggccagtcgcaggtaccggaccggtgtaca
ccacgcgtcaccgacgagcaggcctgggcggtgttcgcgcagtgggaggccgcgggcggg
ccgtcggtcgaggaatcggtcatcggtgctcgcagttccctcgaaaagccggtgcccgta
cccggtttcgaggttcggcactttcaccgccggatcgacaccacgtggcggcggacctcg
tactcggatctggtgcggggctcggaagccgtcaccgtcaccagcgagccggcggccggc
ggccgtgcggacgaggtggagatcgccgtcgtcgccgcgcccggttccggcgccgatctg
acatcaccgctggccgcactgccgtcgggggcgtcgttcggctcgctggtgcacgcggtg
ctcgagaccgcggacccagccgctcccgatctggctgccgaactggaagcccaggtgcgc
cggcacgcgccgtggtggaccgtggacgtcgaccacgcgcagctggctcccgaactggcc
cgagcgttgctgccgatgcacgacacgccgctgggacccgccgccgccgcactgacattg
cggcagatcggtgtgcgtgatcgtctgcgggagttggacttcgagatgccgctggccggg
ggcgatctgcgcggccggtccccggacgtgtcgctggccgacgtgggtgagctgctggcg
tcgcacctgcccggcgacgacccgttgtcgccctacgccgatcggcttggttcggccggg
ttgggtgatcaaccgctgcgtggctacctggcggggtcgatcgacgtggtgctgcggcta
cccgggcagcgatatctggtggtcgattacaagaccaatcaccttggtgacaccgccgcc
gattacggcttcgagcggttgaccgaggccatgctgcattcggactacccactgcaggcg
ctgctgtatgttgttgtgctgcaccgctttctgcggtggcggcagcgggattacgctccg
gcgcgccatctcggcggggtgctgtacctgtttgtgcggggcatgtgcggtgcggcgacg
ccggtgacggccgggcatccggccggtgtgttcacctggaacccgcccacggcgttggtg
gtggcgctctcggatctgctcgaccggggaaggctgcagtcgtga
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