Thermothelomyces thermophilus: MYCTH_2055144
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Entry
MYCTH_2055144 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03013
Nucleocytoplasmic transport
mtm03015
mRNA surveillance pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2055144
09122 Translation
03013 Nucleocytoplasmic transport
MYCTH_2055144
03015 mRNA surveillance pathway
MYCTH_2055144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2055144
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2055144
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCTH_2055144
TREX complex
MYCTH_2055144
Spliceosome [BR:
mtm03041
]
Complex C
Other components
EJC/TREX
MYCTH_2055144
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MYCTH_2055144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
11508409
NCBI-ProteinID:
XP_003659228
JGI:
2055144
UniProt:
G2PZW0
LinkDB
All DBs
Position
1:join(3698479..3698532,3698624..3698692,3699035..3699069,3699129..3699164,3699232..3699276,3699343..3699409,3699513..3700262)
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AA seq
351 aa
AA seq
DB search
MDRALDRSLDEILEERKQNNRSSRGGRRRDRSDYPRDGVRKSFRDDAPRNLDSEWVHDKF
EDYGTRRSAPRRRYSPEPTSETRGTKLRVDNLHYELTQEDLEDLFSRIGPLISLEMKYDR
AGRSEGTAFVTYESRRDALQAIREYDGANAAGQPIRLTLLPGGPSAGASRGGGRSGGNHP
FDSSANAGRPLAERITVPGQGRSRSLSPHRRGPGGGGGRDSDEEAARRGVDRYRPRGGGG
SGRLSRSRSPIGGRGGGGRRRDGGGGGGGGGRRSGARGNRGGGGDRSGRPKKTQEELDAE
MEDYFNSGSGGGGGAARQSEGAAAGAAAGINGAVAQQQQQQNLGEDIDMIE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgccctcgatcgtagtcttgacgagatccttgaggagcgcaagcagaacaac
agaagttctcgcggcggccgtcgccgcgacagatccgattaccccagagatggcgtcaga
aagtccttcagagatgacgcaccgcggaaccttgattccgaatgggtccacgacaagttt
gaagattacggtacccgccgctctgctcccagacgcagatattctcccgagccgaccagc
gaaaccaggggcaccaagctcagggtagacaaccttcactacgaactgacccaagaagac
ctcgaggacctcttttcccgcatcggccccctcatcagcctcgagatgaagtacgaccgc
gccggccgctctgagggtaccgccttcgtgacgtacgagtcccgccgcgacgccctgcag
gccatccgggagtacgacggcgccaacgccgccggccagcccatcaggctgaccctgctg
cccggcgggccgtcggccggcgcctcgagggggggaggccggtccggcggcaaccatccg
ttcgactcgtccgccaacgccggccgcccgctcgccgagcgcattacggtgcccgggcag
ggcaggtcccgctcgctctcgccacaccggagggggccaggtggcggcggcggcagggac
tcggatgaggaggctgcgcgcaggggggtggatcggtatcggccccgcggaggcggcgga
tccggcaggctcagtaggtctaggagtcccattggtggtcggggtggaggaggcaggcgg
agggatggtggtggtggtggtggtggtggtggaaggaggtcgggtgcccggggtaaccgt
ggcggcggcggtgaccggagcgggcggcccaagaagacgcaggaggagttggatgccgag
atggaggactacttcaacagcggtagcggtggaggcggtggcgctgcgcggcagagtgag
ggtgctgcggcgggcgctgcggcgggcatcaatggggctgttgcgcagcagcagcaacag
cagaacctgggcgaggacattgacatgattgagtga
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