Thermothelomyces thermophilus: MYCTH_2312035
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Entry
MYCTH_2312035 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2312035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2312035
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MYCTH_2312035
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MYCTH_2312035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF5577
Motif
Other DBs
NCBI-GeneID:
11507264
NCBI-ProteinID:
XP_003666901
JGI:
2312035
UniProt:
G2QPZ3
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All DBs
Position
7:complement(join(1819723..1820436,1820568..1821101))
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AA seq
415 aa
AA seq
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MASSQHVLLSPAELAYLHSSLSLTPPIRPDGRSPTQFRPLVAETGILPGTNGSARICFAD
GTEAIVGVKAEVERTAQRPGDETVFLEEGGASGDGDDDDGGEEGEGGEEEDGRKGTGVDR
RKGEASWVEMTVEIPGLRDDDSGTTFLSALLSEALLADGEFVKKLWINRRFHWKLYLDII
LISPPLSYPLPLLSLTTHLALLSTRLPRLKSEGDEDPFFDDDWAAAPYLFPRSTSSTTAA
AKQTVIATRPPITLLVMAVGNNIIFDPSKEELAVADVALAVSVTSGGGGGGGGGGGGGRQ
GRNNDDAAGADMDVDGIAAGGRNLRLLSIRTIDPPSRLTPPGVPNAANAAYGAAAPGTQK
MLEARTAETEAVEGVWKPPRGGAKRMVLGALVQKVLERGGVVDEVLDALEGVELG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagccaacacgtcctcctctcgcccgccgagctcgcctacctacacagctcg
ctctccctgaccccgcccatccggccggacggccggtccccgacccagtttcgccccctc
gtcgccgagaccggcatcctccccggcaccaacggcagcgcgaggatatgcttcgccgac
ggcaccgaggccatcgtcggcgtgaaggccgaggtcgaacggactgcgcaacggccgggc
gacgagaccgtcttcctcgaggagggcggcgccagcggggatggggatgacgacgacggc
ggcgaggagggggagggaggagaggaggaggatggtaggaaaggaaccggggtagatagg
aggaaaggcgaggcgtcgtgggtggagatgacggttgagattcccgggctgagggatgac
gactccgggacgaccttcttgtcggccctgttgagcgaggcgctgctcgcggacggcgag
ttcgtcaagaagctgtggatcaacaggcggtttcattggaagctatatctcgatatcatc
ctcatctccccacccctctcctatcccctcccgctcctctccctcacaacccacctggcc
ctcctctccacccgcctcccgcgcctcaaatccgagggcgatgaggaccctttcttcgac
gacgactgggccgcagcgccctatctcttcccaaggtcgacctcatccaccaccgccgcc
gccaaacagacagtcatcgcgacccggccccccataaccctcctagtaatggccgtcggc
aacaacatcatcttcgacccgtccaaggaggagctcgccgtcgccgacgtggccttggcc
gtatccgtcaccagcggcggcggcggcggcggcggcggcggcggcggcgggggtcgtcaa
gggaggaacaacgacgacgccgccggtgcggacatggacgtagacggcatcgccgcgggg
ggcaggaacctacggctgctgtccatccggacgatcgacccgccgtcgaggctgacgccg
ccgggcgtgcccaacgcggcgaacgcggcgtacggggccgcggccccgggcacgcagaag
atgctggaggcgcggaccgccgagacggaggcggtcgagggcgtgtggaagcccccgcgc
gggggcgccaagaggatggtgctcggggcgctggtgcagaaggtgctcgagcggggcggg
gtggtagacgaggtgttggatgccttggagggggttgagttggggtaa
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