KEGG   Methanothrix thermoacetophila: Mthe_0844
Entry
Mthe_0844         CDS       T00417                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mtp  Methanothrix thermoacetophila
Pathway
mtp03030  DNA replication
mtp03410  Base excision repair
mtp03420  Nucleotide excision repair
mtp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mthe_0844
   03410 Base excision repair
    Mthe_0844
   03420 Nucleotide excision repair
    Mthe_0844
   03430 Mismatch repair
    Mthe_0844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtp03032]
    Mthe_0844
   03400 DNA repair and recombination proteins [BR:mtp03400]
    Mthe_0844
Enzymes [BR:mtp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mthe_0844
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mthe_0844
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mthe_0844
DNA replication proteins [BR:mtp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mthe_0844
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mthe_0844
DNA repair and recombination proteins [BR:mtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mthe_0844
   NER (nucleotide excision repair)
    Other NER factors
     Mthe_0844
   MMR (mismatch excision repair)
    Other MMR factors
     Mthe_0844
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ABK14633
UniProt: A0B7F9
LinkDB
Position
complement(910878..912536)
AA seq 552 aa
MTGFARFAELCERISQTSGSLEKTDILASFLSDLESDDLRIVAGFVMGVVIPGTELGVGP
SLLYESISRATGLSSDAVNELLRATGDPGLVAYRAVERRKPLTLAAFSGSEGLEVQDVYQ
RFLSIAKASGRGSQEIRVKNLQYMFSEASPLEAKYIARLAMEDMRIGVGEGLVRDAIAKA
FGVSKEDVERAYNLTNDLGLVAEYAKLGRLNELGISINRPIKMMLAQIGESIEASLAEGA
TAVEWKFDGARVQIHKDKGNVRIFSRRLEDVTSSLPEIREIVRGHVRARTAILDGEAVAT
GEDGRPLPFQEILRRFRRKYGVARTAKTIPLKLHLFDIIYMDGASLLDEPLEERRRVLVS
VADPEIIAEQVVTSDVHRVEEIYREALAAGHEGVMLKNPSSTYTPGKRGKNWLKIKPLLE
SLDLVVIGARWGEGKRANLLGSYRLACIDTDTGELKDVGWVATGITDEMLAELTELFREL
IVKENGMEVEVHPEIVFEVGYEEIQRSPNYSSGYALRFPRLIAVRDDKSPSEADTLERIG
EIYRLQRGRSKK
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgacaggcttcgcgagattcgcagagctctgcgagcggatatcacaaacatcaggctct
cttgagaagacagacatactggcatccttcctatcagatctggaatcagatgatcttaga
atcgttgcaggcttcgtcatgggtgtcgtcataccgggaacagagctcggtgtcggccca
agccttctctacgagtccatatccagggcaacaggcctgagcagcgatgcagtaaatgag
ctcctgcgtgccaccggagatcccgggcttgtcgcgtacagagcggtcgagaggagaaaa
ccgctcacgcttgcggcattctccggaagcgaggggctcgaggtacaggatgtctatcag
aggtttctctcgatagcaaaggcctccggcaggggcagtcaggagatcagggtgaagaat
cttcagtacatgttcagtgaggcctcgccgctggaggcaaagtacatcgccaggctcgcg
atggaggacatgaggataggcgtcggcgaggggctcgtaagggatgcgattgcaaaggca
tttggtgtgtctaaagaggatgtggagagggcgtacaacctgacgaatgatctggggctg
gtcgcagagtacgcgaagctcggaaggctgaacgagctggggataagcataaaccgtccg
atcaagatgatgctggctcagatcggtgagagcatcgaggcctctctcgcagagggcgcg
acagcagtggaatggaagttcgatggcgccagggtccagatccataaggataagggaaat
gtgagaatattctcccgcagacttgaggatgtcacatcgtccctgcccgagataagggag
atcgtgagggggcatgtcagggcgaggacagcaatcctcgatggggaggctgtggcaaca
ggcgaggacgggcggccgctcccgttccaggagatactaaggaggttccgcaggaagtac
ggagtcgcgaggactgcgaagacgatacccctgaaactgcacctcttcgacataatatac
atggacggggcgagccttcttgatgaacctctggaggagaggcggagggtcctcgtcagc
gtggcggatcctgagatcatagctgagcaggtagtgacgagcgatgtccacagggtggag
gagatctacagagaggcgcttgcagccgggcacgagggcgtgatgctcaagaatccctca
tcgacgtacactccgggcaagaggggcaagaactggctcaagatcaaaccgctcctcgaa
tccctggatctcgttgtgatcggcgcacggtggggggaagggaagagagcgaaccttctc
ggctcttacaggctcgcctgcatcgacaccgataccggggagctgaaggatgtcggctgg
gtcgcaacagggatcacggatgagatgctcgcggagctcaccgagctcttccgggagctg
atagtcaaggagaacgggatggaggtggaggttcatccggagatcgtcttcgaggtgggc
tatgaggagatccagaggagccccaattactcatccggctacgccctgcgttttccaagg
ctgatcgccgtcagggatgataaatcaccatctgaagctgatacgcttgagaggattggc
gagatatatcggcttcagaggggcagatccaaaaaatga

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