Medicago truncatula (barrel medic): 11443023
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Entry
11443023 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
11443023
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11443023
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11443023
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11443023
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
11443023
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
11443023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Motif
Other DBs
NCBI-GeneID:
11443023
NCBI-ProteinID:
XP_003601357
UniProt:
G7J6M6
LinkDB
All DBs
Position
3:39512824..39528690
Genome browser
AA seq
1119 aa
AA seq
DB search
MTVMMSAPIDQQEDEEVLVPHADLPENNNHQPMEVVAQPETANTVESQPVPDPPQTRFTW
RIDNFTRLNTKKLYSEVFVVGAYKWRVLIFPKGNNVDYLSMYLDVADSTSLPYGWSRYAQ
FSLAIVNQIHNKFTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIEAEV
LVRKIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPS
GSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL
EGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSQLDL
DRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKE
DNKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
EHLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDIEGQMGKDIYFDLVDHDKVRSFR
VQKQTPFNVFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTQIEETQTVGQLREVS
NKVHNAELKLFLEVEKGMDLCPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCTGK
PSEILTRLNEMAGYVPEEDIVLYEEIKFEPNVMCEPIDKKVTFRASQLEDGDIVCFQKAP
LVDNEEQVRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFSLEMSRLYTYDDVVERVAQQL
GLDDPSKIRLTPHNCYSQQPKPQPIKHRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ
GLKTLKVAFHHAIKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPDAELRLLEVFYHKI
YKVFPSNEKIENINDQYWTLRAEEIPEEEKNIGPQDRLIHVYHFTKDTAQNQMQIQNFGD
PFFLVIHEGEALSEIKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRD
VYGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcatgatgtccgctcccattgaccagcaagaggatgaagaagtgctcgtgcca
cacgctgatttgcccgagaacaacaatcatcagcctatggaagttgtagctcaacctgaa
actgccaataccgtggagagccagcctgtcccggatcctccacaaaccagattcacatgg
agaattgacaattttactaggctgaatacaaaaaagctctattcagaagtattcgttgtt
ggtgcttataaatggcgtgtgcttattttcccaaaaggaaacaatgtggactatttgtcc
atgtatttggatgtcgcggattcaactagtttgccctatggttggagtagatatgcacag
tttagtttggcaattgttaatcaaatccataataagttcaccgtgagaaaagacacacaa
catcaatttaatgcgcgagaaagtgattggggtttcacatctttcatgcctcttggtgaa
ttgtatgatcctagtagagggtatctcgtgaatgatactcttataatcgaagcagaggtt
cttgttcgtaagattgttgattactggaattatgactcaaagaaggagaccggctatgtt
gggctcaagaatcaaggagctacctgttatatgaattctctacttcaaacattgtaccat
attccttattttaggaaggctgtgtaccatatgccaacaactgaaaatgatatgccctcg
ggaagcatccctttggctctgcaaagtttattctacaagctccaatatagtgacaccagc
gttgcaacaaaggagctgacaaaatcttttggatgggatacatatgattctttcatgcag
catgatgttcaagaactaaatcgggtcctctgtgaaaaacttgaagacaaaatgaaggga
accgttgttgagggaactatacaaaagctatttgaaggacaccatatgaactacatagag
tgcatcaatgtggactacaaatcaactagaaaggagtcattttatgaccttcagcttgat
gtcaaaggctgtcgcgatgtttatgcttcctttgataagtatgttgaagttgaacgtctt
gagggggataacaaatatcacgctgaacaatatggtttgcaggatgctaagaagggtgtc
ctatttattgattttcctcctgttcttcagcttcagctcaaaagatttgaatatgacttt
atgcgggatactatggttaagattaatgaccgttatgagtttccctcacaacttgatctt
gatcgtgagaatggaaaatatctatcacctgatgctgacaggagtgtccgcaatctttac
acacttcacagtgttttggttcacagtgggggcgtgcatggtgggcattattatgctttt
atcaggccaactctctctgaacagtggtacaaattcgatgatgagagggtgacgaaagaa
gacaataagcgggcactagaggagcaatatggtggtgaggaagagttaccgcaaacaaat
cctgggttcaataacccaccatttaaattcaccaaatattcaaatgcttatatgctggtg
tatatacgtgaaagtgacaaggacaaaatcatatgcaacgtggatgagaaagacattgct
gaacatttaagggagaggttgaagaaagaacaagaagaaaaagagcacaaaaagaaagaa
aaggctgaggcgcatctttatacaattatcaaggtggcacgggatgaagacattgaaggg
cagatgggaaaggatatctactttgatcttgtagaccacgacaaagtgagaagtttccgt
gtacaaaagcagacaccttttaatgttttcaaggaagaggttgcaaaagagtttggtata
ccagttcaatttcagcgcttttggctgtgggctaagcgtcaaaaccatacttatcggcct
aatagaccgctgacacaaattgaggaaacacaaactgtcggacaattgagagaagtgtca
aacaaggttcataatgcagaactgaagttgtttttggaagtggagaaggggatggattta
tgtcccattgcaccacctgacaagacaaaggacgatatattacttttctttaagctatat
gatcctgaaaaagaggagcttcgctatgttggaaggctctttgtgaagtgtactggcaag
ccatcagaaatcttaacaaggctaaatgaaatggctggttatgttcctgaagaagatatt
gtactttatgaggagattaagtttgagccaaatgtcatgtgcgaacctattgataagaaa
gtaacatttcgagcaagccagctggaggatggagatattgtatgctttcagaaagctccc
ttagtagataatgaggaacaagttcgctatccagatgtgccctcatatttagaatatgtt
cataaccgccaggtggttcattttcgatcattggacagacccaaggaagatgacttctct
ttggagatgtcaagactttatacatatgatgatgtggtggagagagtagctcaacaactt
ggcttggatgatccatccaaaatacgtcttacccctcacaactgctactctcaacaaccg
aaaccccagcctattaagcaccgaggggtggatcatttgtctgatatgctagttcattac
aatcagacatcagatatattatactatgaagtgctcgacatccctctacccgaattacaa
ggcttgaaaactctgaaagttgcatttcatcatgccatcaaggacgaggtggttagtcac
actatcagactcccaaagcagagcactgttggagatgtccttgatgatcttaaaaccaag
gtggagttatctcatcctgatgctgagctaaggttgcttgaagtcttctatcacaagata
tacaaggtgtttccatccaatgaaaagattgaaaatattaatgatcaatactggacattg
cgagcagaggagattccagaagaagagaaaaacattggtccacaggatcgtctaattcat
gtgtaccattttactaaagacactgctcaaaatcaaatgcaaattcaaaacttcggggat
ccctttttcttggttatacacgaaggtgaagctctatctgaaattaaagtgcgaatacag
aagaaacttcaagttcctgacgaagagtttagcaagtggaagtttgcttttctatcactt
gggcgtccagagtaccttcaggattcagacattgtatccagtcgttttcagaggcgagat
gtttatggtgcttgggagcaatatcttggcttggagcatactgacaatgctcctaaaaga
tcatatgctgtcaaccagaatcgtcacacgtttgagaagccagtaaagatttataattag
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