Medicago truncatula (barrel medic): 11444847
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Entry
11444847 CDS
T01716
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X1
KO
K04523
ubiquilin
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
11444847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11444847
03051 Proteasome [BR:
mtr03051
]
11444847
Membrane trafficking [BR:
mtr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
11444847
Proteasome [BR:
mtr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
11444847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
TBK1_ULD
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
UN_NPL4
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
11444847
NCBI-ProteinID:
XP_003629155
UniProt:
G7L9G3
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All DBs
Position
8:complement(33721669..33727715)
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AA seq
539 aa
AA seq
DB search
MGGDGAVEDSASESKTEVNINVRCSNGTKYSVQVSLDSTVGSFKDLIARNCDIPAQQQRL
IYKGRILKDDQTLQSYGLEADHAVHLVRSFAPTNASGGTNSSGTNTTTNDAAGAGANAAG
GLGGLGFGASLFPGLGANGTGRNTLFGEGFPDLEQMQQPFISNPNLMREMMNSPAMQNLV
SNPEIVRNLIMNNPQMQELMDRNPELAHVLNDPSTLRQTLEATRNPEIMREMMRNTDRAM
SNIESSPEGFNMLRRMYENVQEPFLNATTMAGNTALSGTQGGLSRDQSTNPSTTNSETTA
GSPIPNANPLPNPWSSTGTGAPQNNTRSSTTGGDARQQAPTGLGGLGLPGLEGMLGGSGM
PDPALLTQLMQNPAISQMMQSMLSNPQTLSQILGAANTEQRGGMPDLNSLRDVMQNPEFL
RLFQSPETMQQLMSFQQALLSQQQSTRESGQTGQTGGGTGPFNNMGLEMLSSMFGGLGAG
GLGAAPNRSNEPPEQLYATQLTQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNTGQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgacggtgccgttgaagattccgcttcagaatcgaagaccgaagttaacatc
aatgttcgatgctctaacggtacaaagtattccgttcaggtttctctcgattccacggtt
ggatcgttcaaggatctcattgcgcgtaactgtgatatccccgcacaacaacaacgtctc
atctacaaaggtcgtatattgaaggatgatcaaacgcttcaaagctatggtttggaggca
gatcatgctgtgcatttggttcgtagctttgcacctaccaatgcgagtggtgggaccaat
agtagtggcaccaataccacaacaaatgatgccgcaggcgctggagctaatgctgctggg
ggtttaggagggctcggttttggagcttcattgtttcctggactaggtgccaatggcact
gggagaaataccttatttggcgagggatttccagatcttgaacaaatgcagcaaccattt
atttcaaatcccaatttaatgagagaaatgatgaattcacctgctatgcagaatctagta
agtaaccccgagatagtgcggaatcttataatgaacaacccacagatgcaagagctcatg
gatcgaaaccctgagctagcacacgtacttaatgatcccagtactctccgccagaccctt
gaagctacaaggaaccctgagatcatgcgtgaaatgatgagaaatacagatagggcaatg
agcaacattgaatcatctcctgagggattcaacatgctgaggcgcatgtatgaaaacgtt
caagaaccatttttaaatgccactacaatggccggtaatacagcactttcagggactcag
ggtggcctatccagggaccaatcaactaatccctcaaccactaattctgaaacaactgct
ggctctcccattcccaatgctaacccacttcctaatccttggtcctctacaggaactgga
gctccccaaaataacaccaggagttcaaccactggtggggatgctaggcagcaagcacct
actggcttaggagggcttggtttgcctggccttgaaggcatgctgggtggtagtggtatg
ccagatcctgctttattgactcaattaatgcaaaatccagctatctcacaaatgatgcaa
agtatgctttccaacccacaaactttgagtcagattcttggtgctgctaatactgaacaa
cgtggtggcatgcctgatttaaattctcttagagatgtgatgcaaaatcctgagttccta
cgtttgtttcaatcacctgagacaatgcagcaactcatgtctttccagcaagctcttctg
tctcagcaacaatcaacacgggaatcgggtcaaactggtcaaactggtggagggactgga
ccatttaacaacatggggttggagatgttatccagcatgtttggtggccttggagctggt
ggccttggagctgctccaaatagatcaaatgagccaccagagcaattgtatgccacccag
cttacacagcttcaagagatgggattctttgacacacaagagaacataagggctcttatt
gccacttcagggaatgttcatgcggccgttgaacgtcttttagggaacactggtcagtag
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