Medicago truncatula (barrel medic): 25488025
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Entry
25488025 CDS
T01716
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33B
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25488025
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
25488025
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alliinase_C
Motif
Other DBs
NCBI-GeneID:
25488025
NCBI-ProteinID:
XP_013465657
UniProt:
A0A072VE06
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Position
2:complement(51939562..51948309)
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AA seq
1316 aa
AA seq
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MTTAVVWERVIEITKCGRSTEVWSIEVTSWLKTAGVLLPSVELAHRLVSHICWDNNVAVT
WKYLEKAMESRMVPPFLVLALLSTKVVPNRHPLLHPPAYSLYLHLLNTHAFSLSSLINSP
NYPSLMNSIHQLLRLSQLYHDSSSYPPPPPPPHPGVVLVQFLFTLVWQLLQASLQDEALL
QHKNSLLFLDHPDLTMELDNHHHHPLHAKNTATAIQFIAHFLHNKLTSRILSLVQRNMST
HWGAFVDDLEQLAANSLILRSLKHDVSPELFYPLNLKLNWPLSCESNKKMKLSSVLCASG
SGSADQSHNDSSLWLPIDLILEDAMDGHHHVMAASAVELLTDLVKALQAVNATAWHNAFL
GLWFAALRLVQRERDPSEGPVPRLDTCLCMLLCITTLVVANLIEEEEGELIEEAERSPRN
QRKDKLAMGKRRGELVASLQLLGDYEDLLNPPQPVTWVANQAAAKATMFVSGHSGYLEYM
NVNDLPTNCSGNLRHLIVEACIARHLIDTSAYFWPGYVSAPSNQLPRGIPNHLPSWSSLM
KGSLLNPPWVNVLVATPASSLAEIEKIFEFAINGSDEEKISAATILCGASLVRGWNVQEH
VVFFIIKLLSPAVPPKYAGTENHLISYAPFLNVLLIGISSVDSVQIFSLHGAVPLLAAAL
MPICEAFGSCVPSVSWTAATGEKLSCHVVFSNAFVLLLRLWQFNHPPVEHVMGGAATPAL
GSQLGPEYLLLVRNSTLASFGKSPRDRIKSRRFSKMISFSTEPVFMDSFPKLNTWYQQHQ
ECLASTRCALVPGGPILRIVDALLSMMCRKINRSAQSLTSTTSGSSNSSGSSLDDALMKL
KVPAWDILEAAPFVLDAALTACAHGRLSPRELATGLKDIADFLPASLATIVSYLSAEVTR
GVWKPAFMNGTDWPSPAANLSIVEQQIKKILAATGVDVPSLAIDGNAPATLPLPLAAFLS
LTITYKLDKSSERFLVLIGPSMINLSAGCPWPCMPIVGSLWAQKVKRWSDFFVFSASRTV
FHHSRDAVVQLLKSCFTSTLGLGSACIYNNGGVGALLGHGFGSHFLGGISPVAPGILYLR
VYRSIRDAMFLTEEIVSLLMLSVRDIASGGLPNGEAHKPKMTKYGMRYGQVSLAASMTRV
KHAALLGASFLWISGGSSLIQSLITETLPSWFLSAPGLEQEVGESGVVVAILRGYALACF
AVLSGTFAWGIDSLSAASKRRPKIIGIHLEFLANALDGKISLRCDCATWRAYVSGFMSLM
VSCTPLWIEELDVDMLKRVSKGLRQMNEDGLALQLLEIRGKSLMGEVAEMIIQNEL
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcggtggtgtgggagagggtaatagagataactaagtgtggacgttcaact
gaagtatggtcaattgaggtaacctcatggctgaagacggcgggtgtgttgttaccgtcg
gtggagcttgcacaccgccttgtgtctcacatctgttgggacaacaacgttgctgtgaca
tggaaatacttagagaaagctatggaatcaagaatggttcctcctttccttgtcttggct
ctcctctccacaaaagtagtacccaacagacaccctcttcttcaccctccagcttactct
ctctaccttcaccttctcaacacacacgctttctctctctcttctctcatcaattctcct
aattacccttctctcatgaactccattcatcaacttcttcgcctttcccaactctatcat
gattcttcttcttatcctcctcctcctcctcctcctcaccctggcgttgttcttgttcaa
tttcttttcactcttgtgtggcagttacttcaagcatccttacaggacgaagccttactc
caacataagaattccttattattcctcgatcatcccgatctcactatggaattggataat
caccaccaccatcctctacacgccaaaaatactgcaacagctattcaattcattgcacac
tttcttcacaacaaactcacttcaaggatcctctccttggttcaacgaaacatgtcaacg
cattggggtgcttttgttgatgacctagagcagcttgcagcgaactcgttgattttgagg
agcttgaaacatgatgtatctcctgagttgttttatcctttgaatttaaaattgaattgg
cctttgtcttgtgaatcgaacaagaagatgaagttgagctcagtgttgtgtgcaagtggg
agtggaagtgccgaccaatctcataatgatagttcactttggcttcccattgatctaata
ctggaggatgcaatggatggtcatcatcatgtcatggctgccagtgctgttgaacttctt
actgacttggtcaaggctttacaggcagtcaatgctactgcatggcacaatgctttttta
ggtttatggtttgctgccctgcggctcgttcaacgggagagagatcctagtgagggtcct
gtacctcgccttgatacctgcttgtgtatgttattgtgcattacgacccttgtagttgct
aatcttattgaagaagaggaaggtgaactgattgaagaagctgaacgtagccctagaaat
caaaggaaggacaagctggctatgggaaagcgtcgtggggaattggttgcaagcttacag
ttattgggtgattatgaggatttactcaatccacctcagcctgttacttgggtagctaat
caggctgctgccaaggctactatgtttgtatcgggacatagtggatacttggaatatatg
aatgtgaatgacttacccacaaactgctctggtaacctgcggcatttgattgttgaggct
tgtattgcaagacatctgattgatacctcggcttatttttggcctggttatgtgagtgca
ccttccaatcagctacctcgtggtattcccaaccatttacctagctggtcatcattgatg
aagggttcactgctaaatcctccatgggttaatgtcttagttgcaactcctgcttccagc
ttagcagagattgagaaaatttttgaatttgcaatcaatggctctgatgaagaaaagata
tctgctgctaccattctttgtggagcatctctagtacgtgggtggaatgtgcaggaacac
gtcgtttttttcatcataaaattgctttctcctgcggttcctcctaaatacgccgggaca
gaaaaccatttgattagctatgctccatttttgaatgtcctactgattggaatttcatct
gtagacagtgttcagattttctccctacatggtgcggttccactacttgctgctgcacta
atgccaatatgtgaggcgtttggatcatgtgttcctagtgtgtcatggactgctgcaact
ggtgaaaaactctcttgccatgtggtgttctctaatgcatttgttctcctgctgagatta
tggcagtttaatcatccacctgttgaacatgtgatgggaggtgcagcaactccagcatta
ggatcacagttaggtcctgagtaccttttattggttcggaatagcacgttagcatccttt
gggaaatcaccaagagatagaataaaaagcagaagattttcaaaaatgataagtttttct
acagagcccgtgtttatggattcctttccaaaactaaacacttggtatcagcaacatcaa
gaatgtcttgcatcaactcgatgtgctctagttcctggagggcctattcttcggatcgtt
gatgcactgttaagcatgatgtgcaggaaaataaatagaagtgctcaatcattgacatct
acgacttcaggaagcagcaactcatctggttcttcattggatgacgctttgatgaaactc
aaagtgccagcatgggatatccttgaagcagctccatttgttcttgatgctgctcttaca
gcttgtgctcatggaagacttagtccccgtgaactggctacaggtctcaaagatattgcg
gattttcttccagcatctttggcaactattgtaagctacttatcagctgaagtaacacgt
ggtgtgtggaagccagcttttatgaacggaactgattggcctagtcctgcagctaattta
tccattgtcgagcaacaaatcaaaaaaattctggcagccactggggttgatgtcccgagc
ctcgcaatagatgggaacgctccagctacacttcctttgcctttggcggcttttctaagt
ctcacaataacctataagcttgataaatcttctgagcgctttcttgttttgattggccca
tctatgatcaacctttctgctggttgcccctggccttgcatgcccattgtaggttctttg
tgggctcagaaggttaagcgctggagtgacttttttgtattctctgcttctagaactgtc
ttccaccatagcagggatgctgtagttcagctcctaaaaagttgcttcacgtccaccctt
gggcttggttctgcctgtatttataacaacggtggtgttggtgctctccttggtcatgga
tttggttctcacttcttaggagggatctctccagttgctcctggaattctctacttgcga
gtttacaggtctattagggatgctatgttcttgacagaagaaattgtatctcttctaatg
ctttcggttagagatatagcaagtggtgggttgcccaacggtgaagcgcacaagccaaag
atgactaaatatggaatgagatacggacaggtttctcttgctgcatcaatgacacgtgtc
aagcatgctgcgcttcttggggcttcttttctttggatatccggtggttctagtttgatt
caatctttgataacagaaactttaccttcatggtttttatcagccccagggttggagcaa
gaagtgggagaatctggggttgtggttgccattcttagaggctatgcattggcatgtttt
gctgtacttagtgggacatttgcttggggtatcgattctttatcagcagcatcaaaacgg
cgaccaaagattattgggattcatctagaatttcttgcaaatgctctagatgggaaaatt
tcacttcgctgtgattgtgcaacttggcgtgcctatgtgtccgggtttatgagcttgatg
gtgagttgcacaccactctggattgaagaacttgatgtggatatgttgaagagagtgagc
aagggattaagacagatgaatgaagacggcctggctctgcagttactagaaatccgaggg
aagagcctcatgggtgaggtagctgaaatgataatacagaatgaactttaa
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