Medicago truncatula (barrel medic): 25501664
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Entry
25501664 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25501664 isoform X2
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_DH-like
Motif
Other DBs
NCBI-GeneID:
25501664
NCBI-ProteinID:
XP_013446447
UniProt:
A0A072TSJ6
LinkDB
All DBs
Position
8:complement(36130126..36158198)
Genome browser
AA seq
3164 aa
AA seq
DB search
MLFNSIFRRKLLSLLQPWLFEEPQLNLELGFFHSLAVVTNLRFDVAVLNKLFHSPPLLFV
KDFTVERLVVRFSSWSSPAFEIEFHGVRVVLSLENPEEDECVRRLRMPKDDYLDDLKKKL
SELDPEGCSLHQILEAILYTVHEKNSFSSSFLNLILKNCHLEAHDIRVDVQFPILNDEFV
CFAEMKEISARSKHLDKKCLLRGFVGTVFVPIKESDFMLDGTGFKVGLNRKNCADRIMLS
SDMKIFFTFRDLKLVDCTLCFPLLACAFYPDDISFCLLFEKLLSDKFNQPRSARELWKIA
SSRIDHVTVTPRFSLQRLVGIVGQWTHYVKTYEEILLLTGYSTGNIWKKSISKMSRNKLS
SGKHRWELISDIEKKLTVEGISLARRIARHRAASKVPFGSHEECAARSNFFRPLLFIVAF
IWGMILKAIHCLRGIFFGEKTVQDPAIDGCCLGSLIKDTCQRCCFVLNFGKITITVSQID
EIHPSVCETLQSHTGIAYSDFLSICFCIDSLLLVSVKDILEQRVFLSCGQMKVELTPSTM
SAEESILSMHSYTTEGKGKEGSRDSKPLMWVEPAKGFLLSETNAMQAEDSFDSHIECFMG
KLLVSWKEICSNFNESEIQYSQNPCLLCKIEISSSYSDHEIPDYGFCECCLLVGKLNLIF
SHSSVSSVSLILSQIQHAIYWEDKKEVSVVSNLLDKVENGWVKKYEYFSKKMILAMLQKL
PERDIHLGVYVDGPSVRFSHRLEANISSQDTTDTSSQDDFDLIFDFHEIEVVVGSPPSLV
GMNLLTAQPGLGDAKTECITLEPRVIEIPKPNNDKYASTGKVAIGSYLHLNGLNACLEKS
TGDHQIQILILKPITLQMLCIRDYIYSLSTKMSSFSAALDITAGGFTVLSFLDEVYMIYK
AIANFSSVVSYLFSSFEDVGCTHPEVMKWEAFFAVPDSNEAIIPGSSQTNDICPFFIDGT
CRINSVDVILHNSRTSGNPECNTRKFDILTGNNKAMKTLPDNGIWISIQQAIMVISCEEA
KMDLSTDLSGITSSVFEYQNSIGNNHENIVLQNLLLQSVHCLHEISLSGCTFSLCLGLVQ
NASSSGNGVKTFGSSTSSSEGSTSHLAQETNLSVFERSNNQSSLIVKKMVPPTNISMQAS
ESHWLVMNVAVYNIFIGSCSMKSDLLRAHKVNKLLFSVSVGGEFNLICWEIQGGLIVLET
SSLPMAIDNYSLYLHYISNLTSVAPQHNKGINLAEDGRESDNLDIEIDQGTVGTSRQAES
GLPDAFDLSLSHLALVLALENESGGIQEIVLEVDIRLKFESGTPGMKLTAELSRLLIFSQ
VIHERVEEEKIIPHFSSVTSKDLSSHLASADPFSGFQKFNELNSDSDASCSKEPIPVQLS
RQNQILKNLRASMSIERPDNGGYWFGIGSLSGFDVTLSVYEIQMILLMASSCSGVSSHNT
TEVSKRNHRSSSQVDNSVEAIVPDGTIVAIQDANQHMYFTVDGEENSFSIGGAIHYSLAG
ERALFRVKHCPQKGWKSTVLWFSLISLFAKNDMGVPLRLNYRPGSCFVDISCTNDGGCAL
WRVCPSEAESYEGVSDSEAFNLTRKRTFYLENKMNNSAIAFVDGALEFVKKPGSPIKFKV
FNDLSVTSDVSETASYPRMALQTPLPTDAESTSSLGGKLPCIDIKIEKISLNIVHELSDT
EDLFPLISLFLNDTQLTVQRLATKSRVISTSSASINYFDAQRNLWEELLHPVEISIFYRS
NVQAQISEYASHAVPVNFFCRITELDISLNENSLDVLLFMIGELKLSGPYSIQSSVILAN
FCKVENQSGLNLLFHFDQQRVTIPRKQSASILLRRLCDFKIQDSDAAISVSIQLADGGSF
ATSPIRLLLPRTQTLAWRTQIMPREGSRTFPGPILVVNISRNSEVGLSFVVSPLIRIHNE
TGFSMELQFQRPAPLEDEFASVLLKPGDSIDDSMATFDAINFSGGVKRALMSLSVGNFLF
ALRPKMTEEFSNSETSLSLEWSDYIKGGKAVRLSGIFDKLNYRVRKALFVKSVKCSFSTV
HCKLMSEGLCVADMHFLIQTIAKDVPVVQPEKSAAVLKNESSKVSLLEQKEIYLLPTVRM
TNLLHSEIDVLLSETDQLNLVGHEKIGKQATISCGSTADFYANPAVIYFTVTLTSSNSSS
KPVNSRDCVKKLLKQNTEVQHLDINLDFDGGKFSATLRLYRGNRGMLEVVVFTSYSVKNE
TDLPVYVLATKRWPLSRIELENLKSNIPSELGLCLLPKSTRSWFLKSERVQLRLLEDHTS
EAPLDLGSLSGLIEISFKKEEGSGIKSVTKLGVSIGPSVGEIVVPSQMVTLVPRYVICNK
SEQSITVRQYYFQDEVEGVISINSKQRMSLPLKEGLTKKREFSVFERLIRKHRIDSDNSL
LYVQIQTNEHGLGWSGPVCLASLGHFFLKFRKEGTTSDNKMTQFAAVHVAEEGSTLVLSF
YKPPNSSLPYRIQNCLHSLSITYYQKGSLEPEVLGPAGSADYVWDDLTLPHRLVVRINDS
LQLREIKLDKVRAWTPFYKLGQQRVLATRLLSDKRSRDQNASFSERDGLEMTKVGYEIYA
EGPTRVLRICEISDSFKRDTVIDLCAKFQLRVSQLAVHILEHVTQEDENERKDFTPIVAV
KLGNLHMITVSNNHQKYNQFIIQHMNLELKWNGAPFASMLRRHQLDFSDPNDCVLKVVFV
TLTSSSNVKQFRYSSIFLQPIDLNLDEETLMKLASFWRTSLSDSESQRIYFDHFEIYPIK
IIANFIPGESQSTYSSTQEALRSLIHSVVKVPSIKNMVVELNGVLITHALITMRELFIKC
AQHYSWYAMRAIYIAKGSPLLPPDFVSIFDDLASSSLDVFFDPSHGLANLPGLTLGTFKL
ISKCIKGEGFSGTKRYFGDLGKTLKSAGSNIAFAAVAEISDSILRGAEANGFDGLMSGFH
QGILKLAMEPSVLGTALMEGGPDRKILLDRSPGVDELYIEGYIQAMLDTVYRQEYLRVRV
IDNQVILKNLPPNQSLINDIMDRVKEFLVSKALLKGDPSTISNPLRRLRGETEWRIGPTL
LTLCEHLFVSFAIRILRRQANKFVSSIKLEKKSSEGGDHADEPANSIIQKVQKVNIKKWG
IARFVMSGLLAYIDGRLCRSIPNPVVRRVVSGFMLSYIDQHDEK
NT seq
9495 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcaatagcattttccgacggaaactactctctctacttcaaccatggcttttc
gaagaaccacaactcaatctcgaattagggttcttccactctctcgccgttgtcaccaat
ctccgcttcgatgtcgctgttctcaacaaactattccactctcctccgttattgttcgtc
aaggatttcactgttgaacgtcttgttgttcgattctcatcctggtcttcaccggctttt
gaaatcgaatttcacggtgttcgtgttgtgctgtcgttagagaatccggaagaggatgaa
tgcgtgaggcgattgcggatgccaaaggatgattatttggatgatcttaagaagaaactt
tcggaacttgatcctgagggttgttctttgcatcaaatcttggaagcaatcttatatact
gtgcatgagaagaatagtttttcatcatcttttctgaatttgattctgaaaaactgtcat
cttgaggcacatgacattcgtgtagatgttcaattcccaatcttaaatgacgagtttgtg
tgttttgcggaaatgaaagagatcagtgcaaggtccaagcatctggataaaaaatgtctt
ctaagaggttttgttggtacagtttttgttccaattaaagagagcgatttcatgttagat
ggcactgggttcaaggttggattaaatagaaaaaactgtgcagatcgaattatgctttca
tctgatatgaagattttctttacattcagagatcttaagctggtagattgcacactatgt
tttccactactcgcttgtgcattctatccagatgatatttctttttgtctacttttcgaa
aaactgctatccgataagttcaatcaacctagaagtgctagagagttatggaaaatagct
tccagcagaattgaccacgtgactgtaactcctagattttcattgcaaagattggttggt
attgtaggtcaatggacacactatgtcaaaacttatgaggaaatcttactgctaactgga
tattctactggcaatatatggaaaaagtccatttctaagatgtctcgtaacaaactgagt
tctggtaaacaccgttgggagttgatatctgacattgagaaaaagttaactgttgaaggc
atatcacttgcgaggcgaatagctcgtcatagagcagcatcgaaagttccatttggttct
catgaggaatgtgcagccagaagtaatttcttccgtcctcttctttttatagtggcattt
atatggggaatgatcttaaaggcgatccattgtctacggggcatattttttggtgaaaaa
acagtgcaagatcctgcaattgatgggtgctgtttgggaagtcttatcaaagacacttgt
caaaggtgttgttttgtgttgaactttgggaaaatcacaatcacagtttctcaaatcgat
gaaattcacccatcagtgtgtgaaacattacaatcacatactgggatagcatactcagat
tttctttcaatatgtttttgcatagattctttgttattagtatctgtaaaagatattctc
gagcagagagtcttcctatcatgcgggcaaatgaaggttgaactcacaccttcaacaatg
tcagcagaagaaagtatattgagtatgcatagttataccactgaaggaaagggaaaagaa
ggtagtcgtgatagcaaaccacttatgtgggttgaacctgcaaaagggtttctcctttca
gaaactaacgccatgcaagctgaagattcttttgattctcatattgaatgttttatggga
aaattgttagtgagttggaaagaaatttgcagtaattttaatgaaagtgagattcaatat
tctcaaaatccatgcctgctctgtaagattgagatatcttcctcatattcagaccatgag
attccagactatgggttttgcgaatgttgtttattggtaggaaaactaaatttgattttt
agtcattcttcagtatcatcagtgtctctaattcttagtcaaatacaacacgctatttac
tgggaggacaagaaggaagtttctgttgtttcaaatttgttggataaagtagaaaatggt
tgggttaaaaaatatgaatatttttccaaaaaaatgattttggctatgcttcaaaaactt
ccagagagagacattcatcttggagtgtatgttgacggtccttcagtgagattttcacac
agattggaggccaatatcagtagtcaagacactactgacactagcagtcaggatgatttt
gacctcatttttgatttccatgagattgaggtggttgttggatcaccaccatctttagtt
ggtatgaacttattgacagctcaaccagggctcggtgatgccaaaacagagtgtattaca
ttggaacctcgggtgatagaaattccgaaacccaacaatgataagtatgcatccacagga
aaggttgcaattggttcttaccttcacctgaatggcttaaatgcttgtttggagaagtca
acaggtgatcatcagattcaaattttaatattgaagccaatcacactccagatgttatgc
attagggattatatttattccttgagcacaaaaatgtcttccttttcagctgctttggat
ataacagctggaggattcactgttttgtcgtttttggatgaggtgtatatgatctataag
gcaattgcaaatttttcttctgtggtttcttatctgtttagcagctttgaagatgttggt
tgcacacatcctgaagttatgaaatgggaggcatttttcgcagtacctgacagcaatgaa
gcaattataccggggagttcacagacaaatgacatatgcccgttttttattgatgggacc
tgcagaatcaattcagtggatgtcattcttcataattctaggacaagtggtaatccggag
tgtaataccagaaagtttgacattttaactggtaacaataaagctatgaaaacattacct
gacaatggaatttggatttctattcagcaggcaattatggtaatatcttgtgaagaagcg
aaaatggatctctccaccgatttatctggaatcacgtcttctgtttttgaataccagaac
tcaattggaaacaaccatgaaaatattgtacttcaaaatttgttattgcaatctgttcat
tgtttacatgaaatatctctttctggctgcacatttagtttatgcttgggccttgttcaa
aatgcctcatcttcagggaacggggtcaaaacatttggtagttccacttctagttctgaa
ggtagtacatctcacttggcacaggaaaccaatttgtctgtctttgaaaggtctaataac
caatcttccctcattgttaaaaaaatggtgcctcctacaaatatcagcatgcaagcttca
gaaagtcactggttagtaatgaatgttgcagtatataatattttcatcggaagctgctca
atgaaaagcgacctacttcgagcacataaagtgaataagcttctgttttcggtttctgtt
ggtggagagtttaatctgatatgctgggagatccagggtggactcattgttcttgaaaca
tcatctttgccaatggccattgataactattctttatatcttcattatattagcaatctc
acttctgttgcaccgcaacataataaaggcatcaatttggcagaagatggcagggagagt
gataatcttgatattgagattgatcaagggactgttggcacatctcgacaagctgaaagt
gggttgccagatgcatttgacttatctttgtctcaccttgctctcgttttagcacttgaa
aatgaatctggtggtatccaagaaattgtattggaggttgacatccgtctgaaatttgaa
tctggaactcctgggatgaaattgacagctgagctttctcgtttattaatcttctcacaa
gttattcatgagagagtggaagaagaaaagataattcctcatttttcttctgtgacatca
aaagatttgtcatctcaccttgcatcagcagatcctttttcaggatttcagaaattcaat
gaattgaactcagatagtgatgcaagttgttcaaaagaacccattcctgttcaattaagt
cgtcagaaccaaattttaaaaaatttaagagcttccatgtcaatagagaggccggataat
ggcgggtattggtttggtattggttctctttcaggtttcgacgtgacactttctgtatat
gaaatccagatgattttgttaatggcctcctcatgttctggggtatccagccacaataca
acagaggtatcgaagagaaatcatcggtctagtagccaagttgacaatagtgtggaagca
attgttcctgatgggacaattgttgctattcaggatgcaaaccaacatatgtattttaca
gttgacggtgaagagaattccttcagtataggcggtgccattcattactctcttgcagga
gaaagggctcttttcagggtcaaacactgcccccaaaaaggatggaagtctacagtttta
tggttttccttgatatcattgtttgctaagaatgatatgggtgtaccattgagattgaat
tatcgaccaggatcatgttttgttgacatctcatgtactaatgatggaggatgcgcactt
tggagagtttgtccatctgaggctgaaagttatgaaggagtatctgactcggaggctttc
aatctaacgaggaagagaactttctaccttgagaacaaaatgaataactctgctattgct
ttcgttgatggtgctctggagtttgtcaagaagcctgggagtccaatcaagttcaaagtt
ttcaatgatctttctgttacttctgatgtttccgagactgctagctaccctagaatggct
ctgcaaacacctttgcccactgatgcagaaagtacatcttcgcttggtggaaaacttcct
tgtattgatattaaaattgagaaaatttccttgaatattgttcacgagctttctgatact
gaagatctcttccctctcattagcttattcctcaacgatacacaacttactgtgcagaga
ttggcaacaaaatctagggtcataagcacttcaagtgcatcaataaattattttgatgct
caaagaaacttatgggaagaacttctccatcctgttgaaattagcattttttaccgatct
aatgttcaggcccagatttcagaatatgcatctcatgcagtgcctgttaatttcttctgc
agaataacagagttggacatatcactaaatgaaaattcgttggatgtgcttctcttcatg
attggggaattgaaattatccggtccttattcaatacaaagctctgtgattctggctaat
ttctgcaaggtggagaatcagtcagggttgaatcttctttttcactttgatcagcaacga
gtaacaattccccgaaaacagtccgcctccattttattaaggaggctctgtgatttcaaa
attcaagattcagatgctgcaatatctgtttctatccaacttgctgatggcggttccttt
gcaacttctcctattcgtctcttacttccacgaacccagactcttgcttggagaacccaa
attatgccaagagaaggttcaagaactttccctgggccgatactcgtggttaacatttct
aggaattcagaggttggtttgtcatttgtggtttctccgttgattagaatacacaatgaa
actggattttcaatggaacttcaattccagcgacctgctccattggaagatgagtttgca
tctgtgttgttaaaaccaggagattctatagatgattctatggctacatttgatgcaata
aacttttctgggggagtaaagagggctttaatgtctttaagtgttggtaacttcttattt
gcacttagacctaaaatgactgaggaatttagtaactctgaaacttctctttcactggaa
tggtcggattatattaaaggcgggaaagctgtccgcctgtctggaatatttgacaaattg
aactacagagttcgcaaggcattatttgtaaaatcagttaaatgttcctttagcacagta
cattgcaaactcatgtctgagggtttatgtgttgccgatatgcattttctcattcagaca
attgctaaagatgtccctgttgtacaacccgaaaagtctgctgctgtgttaaaaaatgag
agttcaaaagtttcattgctagagcagaaagaaatatatcttcttcctaccgtacggatg
acaaacttattacattctgagatagacgtccttttaagtgaaacagatcagctgaatctg
gttggacatgagaaaattgggaagcaggcaacaatatcatgtggttcaacagctgatttt
tatgccaatccagcggttatatacttcactgttactttaacttcttctaattctagttcc
aagccagtaaatagtagggattgcgtgaaaaagttactgaagcagaacactgaagtccaa
catcttgatataaatttggactttgatggaggaaaattttctgcaaccttgagattgtac
cggggaaacaggggcatgctggaggttgttgtttttacatcctattccgtgaagaatgag
acagaccttccggtttacgttcttgcaactaaaagatggcctctatccaggattgaatta
gaaaatttaaagtcaaacattccttcagagctaggattatgtttgcttccaaagtcaacc
agatcatggttcttgaaatctgaaagagtgcaactgagattattggaggaccatacatct
gaggcaccgctagacttgggttcgttatcaggccttatagaaataagctttaaaaaagaa
gaaggatctgggattaaatctgtaacgaagcttggagtgtctattggtccttctgtagga
gagattgttgtgccatcacagatggtgactttggttccacgatatgttatttgtaataaa
tcagaacaaagtattactgttcgccaatactattttcaggatgaggtggaaggtgttatc
tccattaacagcaaacagagaatgtcactgccgctgaaggaaggacttaccaagaaaaga
gagttcagtgtatttgagcggttaatcagaaaacacagaattgacagtgacaattcattg
ttatatgttcagattcaaacaaatgagcatggattgggatggtctgggccagtgtgtcta
gcttcactaggacattttttcctgaaattcagaaaagaaggtacaacgtcagacaacaaa
atgacacaatttgcagctgttcatgtggcagaagaaggttctactcttgttttgagtttc
tacaagccaccaaattcaagtctgccttatcgaattcaaaattgtttgcacagcttatcc
ataacttactatcaaaagggttcattagagccggaggttcttggacctgcaggaagcgct
gattatgtctgggatgatttaactcttcctcatagactggttgtccgcatcaatgatagt
cttcaattacgagagattaagttggataaggtgagagcatggacacctttttataaactt
gggcaacaacgagttttggccacgcgtttgctttcagacaaaagatcaagagatcagaat
gcgagtttcagtgagcgtgatggccttgagatgacaaaagtgggatatgaaatatatgca
gagggaccaacccgagttttgcgaatttgcgagatctctgatagtttcaagagagataca
gttattgatttgtgtgcaaaatttcaactgagagtttctcagcttgcagttcacatactt
gaacatgtaacacaggaagatgaaaatgagcgcaaagattttacaccaattgtagccgtg
aagttggggaatcttcacatgattactgtttctaataaccatcagaaatataaccagttc
attatacagcacatgaacttggagcttaagtggaatggagctccttttgcatcaatgctt
cgcagacatcaattggatttcagtgacccaaatgattgtgtactgaaggttgtttttgtt
acactcacgtccagttcaaatgtgaagcaatttagatactcatcaatttttcttcagcca
attgatttgaaccttgatgaggaaacattgatgaaacttgcatcattttggagaacatct
ctaagtgactcagagagtcagcggatttactttgatcattttgaaatctatccaataaag
atcattgctaattttattcctggggaatcacaatcaacttatagctcaacgcaggaggct
ctaagatccttaattcatagtgtggttaaggtgccttccataaaaaatatggttgtagaa
ctgaatggggttctgataacccatgccctgattacaatgcgtgaattatttattaaatgt
gcacagcactattcatggtatgctatgagagccatatatattgctaaaggaagtccctta
cttccgccggattttgtttctatttttgatgacctggcttcatcatctcttgatgtcttc
tttgatccgtcacatgggttggcaaatcttccaggattaactttaggtactttcaaattg
ataagtaaatgtatcaaaggggaaggtttctcagggacaaaacgctactttggtgatcta
gggaaaactttgaaatcagcaggttccaatatagcttttgcagctgtagcagagatatca
gactctattctgagaggggcagaagcaaatggttttgacggattgatgagtggatttcac
caaggcattctgaaattggctatggagccatcagttctgggaactgctttgatggaaggt
ggtcctgatagaaagatattgcttgatcgaagtccaggggttgatgagctatacattgaa
ggatatatccaagccatgctggatacagtttatagacaagaatatcttagagtcagagtt
attgacaatcaggttatcctgaagaacctaccaccaaatcaatctcttatcaatgacatc
atggatcgtgttaaggagttccttgtcagtaaggcattactaaaaggagatccctcaact
atttcgaaccctttacgccgtcttcgtggagaaactgaatggagaataggaccaacttta
ttgacattgtgcgagcatctttttgttagctttgcaatacgcatactgcgaaggcaggct
aacaagtttgtttcgagcattaaactggaaaagaagtcatcagagggtggtgatcatgca
gatgagcctgcaaactctattattcaaaaagtgcagaaagtgaacattaaaaaatggggc
atcgccagatttgtcatgtctggtttgttggcatatattgatggccgtttatgccgtagt
attcccaatcctgtagtgcggagagtggttagtggttttatgttaagttatattgaccaa
catgatgaaaaataa
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