Micromonospora tulbaghiae: CSH63_22815
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Entry
CSH63_22815 CDS
T05651
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CSH63_22815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtua03400
]
CSH63_22815
Enzymes [BR:
mtua01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CSH63_22815
DNA repair and recombination proteins [BR:
mtua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CSH63_22815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
DNA_ligase_OB_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AYF30230
UniProt:
A0A386WS61
LinkDB
All DBs
Position
complement(4955298..4956236)
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AA seq
312 aa
AA seq
DB search
MPGAPLKPMLATTGQLPAGAAWSYEFKWDGVRALADISRGDRHFYARSGVEITTAYPELL
NLAEQVDDALLDGEVVLFTDGQPSFTALAERMHVRNPAKAARLAATAPVTYMIFDVLRLD
GVDLTARPWRERRAALESLGLGAARWAVPPVFGDGPATYAAAGEHGLEGVMAKRVDSLYR
PGVRSPDWVKVKLEVTADFVVGGWRPGARRVGGLLVGVPGPDGRLIYRGRVGGGIGAAIE
RELLRELEPLRVTDSPFAAGVPREDARGAIWVTPRIVVEVKYGQRTPDGRLRFPRILRLR
PDKPPEEVDDAV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcgcgccgttgaagccgatgctcgcgacgaccgggcagctcccggccggcgcc
gcctggtcgtacgagttcaagtgggacggcgtacgcgcgctcgccgacatctcccgcggc
gaccggcacttctacgcccgctccggcgtcgagatcaccaccgcgtacccggaactgctc
aacctggccgagcaggtcgacgacgcgctgctcgacggcgaggtggtcctcttcaccgac
gggcagccctcgttcaccgcgctcgccgagcggatgcacgtgcgcaacccggcgaaggcg
gcgcggttggcggcgacggcacccgtcacgtacatgatcttcgacgtgttgcggctcgac
ggcgtcgacctgaccgcccggccgtggcgggagcggcgggcggcgctggagtcgctcggg
ctcggcgccgcccggtgggcggtgccgccggtcttcggcgacggcccggccacctacgcg
gcggccggcgagcacgggctggagggggtgatggccaaacgggtcgactcgctctaccgg
cccggcgtgcgctcgccggactgggtgaaggtcaagctggaggtcaccgccgacttcgtg
gtcggcggctggcggcccggcgcgcggcgcgtcggcggcctgctggtcggcgtgcccggc
ccggacggtcggctgatctaccgggggcgggtcggtggcgggatcggcgcggcgatcgaa
cgggaactgctgcgcgagctggaaccgctgcgcgtcaccgactcgccgttcgccgccggt
gtgccgcgcgaggatgcccggggcgcgatctgggtaactccccggatcgtggtggaggtc
aagtacggccagcgcacgccggacggccggctgcgcttcccgcgcatcctgcgcctgcgc
ccggacaagccgcccgaggaggtcgacgatgccgtctga
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