Methylosinus trichosporium: CQW49_12105
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Entry
CQW49_12105 CDS
T05155
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtw
Methylosinus trichosporium
Pathway
mtw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQW49_12105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtw03019
]
CQW49_12105
03400 DNA repair and recombination proteins [BR:
mtw03400
]
CQW49_12105
Enzymes [BR:
mtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CQW49_12105
Messenger RNA biogenesis [BR:
mtw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CQW49_12105
DNA repair and recombination proteins [BR:
mtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CQW49_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
TniB
Motif
Other DBs
NCBI-ProteinID:
ATQ68540
UniProt:
A0A2D2D0M8
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All DBs
Position
2512004..2513584
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AA seq
526 aa
AA seq
DB search
MLNASPDLGEARRVLTSVFGHAEFRPGQERVLACVLAGRDALAVMPTGAGKSLLYQLPAA
MGRAPVVVVSPLISLMRDQLRALGPATAATALHTGQTEAEQARAIAAIAEGRARIIYAAP
ERLAQDSTIALLRAARVKLIAIDEAHCVAHWGHEFRPDYARLGEIAARLGAPPILAVTAT
AGPATRAEIVERLFSRQPEVFVSSFARPNLRLAFERRRDPLRRIVGVLRRHEGRSGIVYC
ASRRKTEETAECLRRLGFDALPYHAGLDAGARAAHQDAFFERPGVAMVATIAFGMGVDKK
DVRYVVHADLPGSIEGYYQEIGRAGRDGLPAEALALFEPRDLAARLVRTAPDGFAAAAAL
RRRAMTRLCLTPACRFQTLLRAFGEESGRCGLCDNCRGGPLSLPRRAGLVLLGLRVAALA
RFASAERAEPETAGEPVSVGLALPSWGEETPLRVADEALLRALRSLRRDIARRRRLPPHR
IASDAQLRQMAATRPRSLGEAPFGADAEITEPEAFLRLLGARPKAQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaacgcatcgcccgatctcggcgaggcgcgtcgcgtcctcaccagcgtcttcggc
catgcggagttccgccccggccaggagcgcgtcctcgcctgtgtgctcgccggccgcgac
gcgctcgccgtgatgcccaccggcgccggcaaatcccttctctatcagctgcccgcggcg
atgggccgcgcgccggtcgtcgtcgtctcgccgttgatctcgctgatgcgcgaccaattg
cgcgcgctcggcccggccacggcggcgacggcgctgcataccggccaaaccgaggcggag
caggcccgggcgatcgccgccatcgccgaggggcgcgcccggatcatctacgccgcgccc
gagcggctcgcgcaagactcgacgatcgcgctgctgcgcgcggcgcgggtgaagctcatc
gcgatcgacgaagcccattgcgtcgcgcattggggccatgaattccgccccgactatgcg
cggctcggcgagatcgccgcgcggctcggtgcgccgcccatcctcgccgtcaccgcgacc
gcgggaccggcgacgcgcgccgagatagtggaaaggctgttttcacgccagccggaggtt
ttcgtctcctccttcgcgcggcccaatcttcgcctcgccttcgagcggcggcgcgatccg
ctgcggcggattgtcggcgtgctccgccggcacgagggacggagcgggatcgtctattgc
gcctcgcgccgcaagaccgaggagacggccgaatgtctgcgccgcctcggcttcgacgct
ctgccctatcacgccggcctcgacgccggcgcgcgcgccgcgcatcaggacgctttcttc
gagcggccgggcgtcgccatggtcgcgaccatcgccttcggcatgggggtcgacaagaag
gacgtgcgctatgtcgtccacgccgatctgcccggctcgatcgagggctattatcaggag
atcggccgcgccggccgcgacggattgccggccgaggcgctggctctgttcgagccgcgc
gatctcgccgcgcgcctcgttcggacggcgcccgacggcttcgccgcggccgccgcgctg
cgtcgccgcgccatgacgcggctctgcctcacgccggcctgccgctttcagacgttgctg
cgcgccttcggcgaggagagcggacgctgcgggctgtgcgacaattgccgcggcgggccg
ctgtcgctgccacgacgcgccggcctcgtccttctcggtctgcgcgtcgccgcgctcgcc
cgtttcgcttccgccgagcgcgcggagccggagaccgccggggagccggtttcggtcggg
ctggcgctcccgagctggggcgaggaaacgccgctacgcgtcgccgacgaagcgctgctg
cgcgccctgcggagcctcaggcgcgacatcgcgcgccgccgccgcctgccgccgcatcgc
atcgcctctgacgcgcagctgcggcagatggcggcgacgcggccacgcagcctcggcgag
gcgccgttcggcgccgacgccgagataacagagccggaggcgttcttgcgcctcctgggc
gctcgcccgaaggcgcagtag
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