Mesitornis unicolor (brown roatelo): 104542308
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Entry
104542308 CDS
T08455
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03013
Nucleocytoplasmic transport
mui03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104542308 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
104542308 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104542308 (THOC1)
03041 Spliceosome [BR:
mui03041
]
104542308 (THOC1)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104542308 (THOC1)
Spliceosome [BR:
mui03041
]
Complex C
Other components
EJC/TREX
104542308 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104542308 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
104542308
NCBI-ProteinID:
XP_010184868
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MRTSTRDALNNKSIKPLLNAFNQIPGSENEKKCTLDQAFRVIVEEEIINKAACENLLAII
SLAISGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVATWKSNTFYSAGKNYL
LRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEHES
TLGQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVS
WKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSDSN
FRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQLLSENPPDGERFSK
MVEHILNTEENWNSWKNEGCPSFVKERSQPELQLGPPDSKPMRPMRKRPAPEDFLGRGPN
KKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMVENKYKAVN
NSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDE
EDNDALLKENNESPEVQRDKAMTGDQMDSFAHRLGEHWRVLAPYLEMKDSDVRQIELDSE
DVRMRAKQLLVAWQDQEGAHATPDNLIAALSKAGLSDLAESLTNDTESSS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgtccactagagatgctctgaataacaaaagtatcaagccattgttgaatgca
tttaaccaaattcctgggagtgaaaatgagaagaagtgtaccttggatcaagcttttaga
gttattgtagaagaagaaataataaacaaagctgcatgtgaaaatctcctggcaattatt
tctcttgctattagtggagtcacagaaggtatctgtacagcatcaaccccttttgtgctt
cttggggatgttctggattgcctccctttggaccagtgtgacaaaattttcacttttgtg
gaaaaaaatgttgccacatggaaatcgaatacattttactctgcagggaaaaattacttg
ctacgaatgtgcaatgacctcctaagaagattatctaagtcacaaaacacagtcttctgt
ggaagaattcagctgttcttggcaaggttatttccactttcagagaagtcaggacttaac
ttgcagagtcagtttaacctggaaaatgtcactgttttcaataccaatgaacatgagagc
actctaggacagaagcacaccgaggagagggaagaaggaatggatgtagaagaaggtgaa
atgggagatgatgaagcaccaacaagttgttccattccaatagattataacctgtataga
aaattctggtcacttcaagattattttagaaatcctgtgcagtgctatgagaaggtctca
tggaaaactttccttaagtactcggaagaagttctggctgtcttcaaaagttacaaattg
gatgacactcaggcttcccgaaaaaagctggaagaactgaaaacaggaggagaacacgta
tattttgcgaagttcctaactagtgaaaagctgatggatttacagctgagtgacagtaac
ttccgccgtcacatcttgttgcagtacctaatactatttcagtatctgaaaggacaggtc
aagtttaaaagttcaaactatgttctaacagatgagcagtctctttggattgaagatact
acaaaagcagtttaccagcttctttcagaaaatcctccagatggggaaagattctcaaaa
atggtggagcatattttaaatactgaagaaaactggaactcatggaaaaatgagggctgc
ccaagctttgtgaaggaaagatctcagccagaattgcagcttgggcctcctgattctaag
ccaatgaggcccatgagaaagaggccagctccagaggactttttaggaagaggaccaaac
aaaaaaatccttatgggaaacgaggaactgacccgcctttggaatttgtgtcctgataac
atggaagcttgtaaatctgagagcagggaatatatgccaacattggaggagttttttgaa
gaagctattgaacaagcagaccctgagaacatggttgaaaacaagtataaggctgtgaac
aattctaactatggctggagagcactgaggcttctagcacgcagaagtccccacttcttc
cagccaacaaaccaacagtttaagagtttacctgaatatctagaaaacatggtaatcaaa
ttagccaaggagctgcctcctccttctgaagaaataaaaacaggcgaagatgaagatgag
gaagataatgatgctttattaaaggaaaacaatgaaagcccagaggtgcagcgggacaaa
gccatgacaggtgaccagatggactcatttgctcacaggcttggggagcactggagagtc
ctggctccctacttggaaatgaaggattctgacgtccggcagatcgagttagacagcgag
gatgtgaggatgagagcgaagcagctgctggtggcctggcaggatcaggagggcgcacac
gcaacccctgacaacctgattgctgccctcagcaaagctgggttaagtgacctcgcagaa
agcctgaccaacgacactgaaagcagcagctaa
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