Pseudoduganella umbonata: FCL38_04920
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Entry
FCL38_04920 CDS
T06138
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mum03009
]
FCL38_04920
Ribosome biogenesis [BR:
mum03009
]
Prokaryotic type
ribosomal protein modification factors
FCL38_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QCP09837
LinkDB
All DBs
Position
1186677..1188878
Genome browser
AA seq
733 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISAKDREGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLTVAPDAATSTYIPGKDLPLEQTIANMSSVLANLGIKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLSNNHFYAGVFWGED
IANADFVHYPEERWFKPGRGDKLPSEILDEYCLDIYDPDGELRGSHLVDTNSGNVARGIC
SLPYVRRSDGETVYFPSNLIENLFVSNGMSAGNTLVEAQVQCLSEIFERAVKREIIEGEI
ALPDVPQEVLAKYPGIVAGIKGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLQVALERSLTELLQGRSFEGLNDLPQPTFASHAVKEPNNFVEHFIDSSGIVSWRF
FSARSDYQFVEWDFSGHGENSNADEAETLFGILEGMGKEVYTAVYDHLGATACRILVPGY
SEIYPVDDLVWDNTNVALQFRADILNLHRLDDAALEALLERLEESELDDYTDIATLIGID
FDENTDWGQLTIQELKLLIHLALQQFEPAHELVGAFLQYNDNTAERRLFYQAMNAVLEVV
LDDDLELDDYVANFRRMFGNPRMDAVLGSVDGTVRFFGLTPTSMKLEGLDRHERLIDSYR
KLHKARAKAAAAR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaagcttcgtctcgaagccaagttcgacgatttc
acggtcatcgccgaccagccgatccgctacaagggcgacggctcggcacctggtccgttc
gactattttttggcatcgtcggccttgtgcgcggcctatttcgtgaagctgtattgctcg
actcgcaatattcccactgaaaatatccgcctgtcgcagaacaatatcgttgacccggaa
aaccgttaccagcagattttcaagatccaggtcgaattgccggccgatatttccgccaag
gaccgcgagggtatcctgcgttcgatcgaccgctgcacggtgaagaaagtggtgcaggcc
ggcccggagttcgtgatcgaggaagtggaaaacctcgatgcggatgcccaggcgctgctg
acggtcgctcccgatgccgcgaccagtacctatatccccggcaaggacctgccgctggaa
cagaccatcgccaacatgtcgagcgtgctcgcgaatctcggcatcaagatcgaaatcgct
tcctggcgcaatatcgtgcccaatgtgtggtcgctgcatatccgcgacgcccattcgccg
atgtgtttcaccaatggcaagggatcgacgaaggagagcgcgctggcgtcggcgctgggc
gagtacatcgagcgcctgagcaacaaccacttctatgccggcgtgttctggggcgaagac
atcgccaacgcggacttcgtgcattatccggaagagcgctggttcaagccgggccggggc
gacaagctgccgtcggaaatcctcgatgaatactgcctggacatctacgatccggacggc
gaattgcgcggctcgcacctggtcgacaccaattccggcaacgtggcccgcggcatctgt
tcgctgccgtatgtacggcgctcggacggtgaaaccgtctatttcccgtccaacctgatc
gaaaacctgttcgtcagcaatggcatgagtgccgggaatacgctggtcgaagcgcaggtg
caatgcctgtcggagattttcgaacgggcggtcaagcgcgaaatcatcgagggcgaaatc
gccttgcccgacgtgccgcaagaagtgctggcgaagtatcccggcatcgtggccggcatc
aaggggctggaagagcagggctttccggtgctcgtgaaggatgcgtcgctgggcggcgtc
tacccggtgatgtgcgtgacgctgatgaacccgcgcaccggcggcgtgttcgcctcgttc
ggcgcccatccgagcctgcaggtcgcgctcgagcgcagcctgacggaattgctgcagggg
cgcagtttcgaaggcctgaacgacctgccgcagcccaccttcgccagtcacgccgtgaag
gagccgaacaacttcgtcgaacacttcatcgattccagcggcatcgtctcgtggcgcttc
ttcagcgccaggtccgattaccagtttgtcgaatgggatttctcaggccacggcgaaaac
tccaatgccgacgaagcggaaaccctgttcggcatcctggaaggcatgggcaaggaagtg
tatacggcggtctatgaccaccttggtgccaccgcctgccggatcctggtgccgggctat
tcggaaatctatccggtcgacgacctggtctgggacaacaccaacgtcgcgctgcagttc
cgtgccgatatcctgaacctgcaccggctggacgacgcggccctcgaagcgctgctcgag
cgcctcgaagaaagcgagctggatgactacaccgacatcgccacgctgatcggcatcgat
ttcgacgagaacaccgactgggggcagctgacgatccaggaactgaagctgctgatccat
ctggccctgcaacagttcgagccggcccacgagctggtcggtgcattcctgcagtacaac
gacaacacggccgagcgccggctgttctaccaggccatgaacgcggtcctggaagtggtg
ctcgacgacgacctggagctggacgactacgtggccaatttccgccgcatgttcggcaac
ccgcgcatggacgcggtgctgggatccgtggacggtaccgtgcgcttcttcggcctgacg
ccgaccagcatgaagctggaaggcctcgaccgccatgagcgcctcatcgacagttaccgg
aaactgcacaaggcacgggcgaaggcggcggcagcgcgctag
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