Pseudoduganella umbonata: FCL38_06980
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Entry
FCL38_06980 CDS
T06138
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mum03021
]
FCL38_06980
Transcription machinery [BR:
mum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FCL38_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_11
HTH_23
MerR
HTH_24
HTH_17
Sigma70_ECF
HTH_38
HTH_3
HTH_IclR
Rv2175c_wHTH
Phage_terminase
PCI
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QCP10194
LinkDB
All DBs
Position
complement(1705394..1705915)
Genome browser
AA seq
173 aa
AA seq
DB search
MNAAPRSNELLALRNAFLGSEFKRSYGWLTAAVHRLVGSRNDAEDLAASTFTELAALDDV
SHIRQPRALLTTIARRLTYEFWRRRDLERAWLAELALRPEGHAASAEEVCMTVEEIVRID
AALATLSSKAREAFILSQFEELGYAEIAQRLGVSVSMVRKYVAQALAACWPAA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaccccgatccaacgaactcctggcgctgcgcaacgccttcctgggcagt
gaattcaagcgcagctacggctggctgaccgccgccgtccaccggctggtagggtcccgc
aacgatgcggaagacctggccgcttccaccttcaccgaactggccgcgctcgacgacgtg
agccacatccgccagccgcgcgcgctgctgacgacgatcgcgcgccgcctcacgtacgag
ttctggcgccgccgcgacctggaacgcgcgtggctggccgagctggcactgcggccggaa
gggcacgctgcttccgccgaggaagtctgcatgacggtcgaggagatcgtgcgcatcgat
gccgcgctggcgacgctgtcgtcgaaggcgcgcgaggccttcatcctcagccagttcgag
gagctcggctatgccgagatcgcgcagcgcctcggcgtgtcggtcagcatggtgcgcaag
tacgtggcgcaggcgctggccgcgtgctggcccgcggcatga
DBGET
integrated database retrieval system
