Pseudoduganella umbonata: FCL38_14300
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Entry
FCL38_14300 CDS
T06138
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mum03009
]
FCL38_14300
Enzymes [BR:
mum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
FCL38_14300
Ribosome biogenesis [BR:
mum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FCL38_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QCP14696
LinkDB
All DBs
Position
complement(3458549..3459571)
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AA seq
340 aa
AA seq
DB search
MKDLERFSGKTTQKARPEAAQSSPQTVLPQAQFVTIGEEEAGQRIDNYLLRICKGVPKSH
VYRILRSGEVRVNKGRIDQLYRLVAGDVVRIPPVRIAEKPDNVVPAAEFPVIYEDAHLLV
IDKPAGVAVHGGSGVSFGVIEQLRASRPDAKFLELVHRLDRETSGLLLLAKKRSALTNLH
EQMRDGETDKRYLALATGDWKNKRQHVKAPLHKYTTGDGERRVAVMETGMPSHTVFTLLR
KYREFALLEAELKTGRTHQIRVHLQSTGFPIAGDDKYGDFAQNKALQKRPVPLKRMFLHA
HQITFRHPESGKIITLNAPLAPECEKFLVSLGQPDNSALQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttagagagattttctgggaagacaacccaaaaggcccggccagaagccgcg
cagtcttccccccaaacagtcctgccacaagcacaattcgtgacgatcggcgaagaagag
gccggacaacgtatcgataactacttgttgcgtatttgcaaaggcgtaccgaagagtcat
gtctaccgcatcctgcgctccggcgaagtgcgggtgaacaagggcaggatcgaccagctg
taccgcctggtggcgggcgacgtggtgcgcatccccccggtgcgcatcgcggagaagccg
gacaatgtcgtgccggcggcggaattccccgtcatttacgaagatgcccacctgctcgtc
atcgacaagccggccggcgtggccgtgcacggcggctccggcgtctcgttcggcgtgatc
gagcagctgcgcgcctcccggccggacgcgaaattcctggaactggtgcaccggctggac
cgtgaaacgtccggcctgctgctgctggcgaaaaaacgctctgcgttgaccaacctgcac
gagcagatgcgcgacggcgaaacggacaagcgctacctggcgttggccaccggcgactgg
aagaacaagcgccagcacgtcaaggcgccgctgcacaagtacacgaccggcgacggcgag
cgccgcgtggccgtcatggaaaccggcatgccttcgcacacggtgttcacgctgctgcgc
aagtaccgggaattcgcgctgctcgaggcggagctgaaaaccggccgcacgcaccagatc
cgcgtgcacctgcaatcgaccggtttccccatcgccggcgacgacaaatacggcgacttc
gcgcagaacaaggcgctgcagaagcgcccggtgccgttgaagcgcatgttcctgcacgcg
caccagatcacgttccggcatcccgagagcgggaaaatcatcacgttgaacgcgccgctc
gcccccgaatgcgaaaaattcttggtaagcttgggccaacctgataactctgctctgcaa
taa
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