Pseudoduganella umbonata: FCL38_21650
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Entry
FCL38_21650 CDS
T06138
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00300
Lysine biosynthesis
mum00470
D-Amino acid metabolism
mum01100
Metabolic pathways
mum01110
Biosynthesis of secondary metabolites
mum01120
Microbial metabolism in diverse environments
mum01230
Biosynthesis of amino acids
Module
mum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCL38_21650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FCL38_21650
Enzymes [BR:
mum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FCL38_21650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QCP12753
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All DBs
Position
5181332..5182567
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AA seq
411 aa
AA seq
DB search
MSALRPQHAPLLQFPVVDDCLQIGGMPLTRLAQRVGQTPFYAYDRGALTARVAELRRHLP
ADVHLHYAMKANPMPAVVQHMASLVDGIDVASGGELRVALDTPMSPLHISFAGPGKSEAD
LSCAIAAGIVLNLESEGETERAARIGDRLGITPRVNVRVNPDFELKSSGMKMGGGPKQFG
IDAERVPALLRRIGELGLDFQGFHIFSGSQNLKAAALHEAHEKTFALALRLAQDAPRAPR
ILNIGGGFGIPYFPGEERLDLATVGSNLHTVMDGVRRQLQGAQVVIELGRYLVGEAGAYV
CRIVDRKESRGSVYLVTDGGLHHHLSASGNFGQVIRKNYPVVIGNRVQGGEREKASVVGP
LCTPLDVLADGMDLARAEPGDLVVVLQSGAYGVSASPASFLSHPAALEVLV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgctccgtccacagcacgcaccgctgctgcagttccccgtcgtcgacgattgc
ctgcaaatcggcggcatgccattgacccggttggcgcagcgcgtcggccagaccccgttt
tacgcgtatgaccgcggtgcgctgacggcgcgcgtggccgagttgcgccggcacctgccg
gccgatgtgcacctgcactatgcgatgaaggccaacccaatgcctgcggtggtgcagcac
atggcttccctggtggatggcatcgatgtggcttccggcggagaattgcgggttgccctc
gatacgccgatgagcccgttgcacatcagctttgccggtccgggcaagagcgaagcggac
ctgtcgtgcgcgatcgctgccggcattgtgctgaacctcgaatcggaaggcgaaaccgag
cgggcggcacgcattggcgacaggctgggtatcacgccgcgcgtcaacgtgcgcgtcaat
cccgacttcgaattgaaatcgtccggcatgaagatgggcggcgggccaaaacagttcggt
atcgatgcggagcgggtgcctgcgctactgcggcgcatcggcgaactgggcctggatttc
cagggcttccacattttctccggttcgcagaacctgaaggcggcggcactgcacgaggcg
catgaaaaaaccttcgcgctggcactgcggctggcccaggacgcgccacgcgcgccacgt
atcctgaacatcggcggcggcttcggcattccctattttcccggcgaagagcggctcgat
ctggcgaccgttggcagcaacttgcatacggtcatggatggcgttcgccgtcagctgcaa
ggagcgcaggtcgtcatcgaactgggccgctacctggttggcgaagccggtgcgtatgtc
tgccggatcgtcgaccgcaaggaatcgcgcggcagcgtgtatctggtgacggatggaggg
ctgcatcatcacctgtcggcatcaggcaacttcggccaggtgattcgcaagaattaccct
gtcgtcatcggcaaccgcgtgcagggcggcgaacgtgaaaaagcatcggtcgtcgggccg
ctgtgcacgccgctcgatgtgctggctgacggaatggacctggcacgcgcggagccgggc
gacctggtcgttgtactgcagtcgggggcatatggcgtatcggccagtccggccagcttc
ctcagccatccggccgcactggaagtgctggtctga
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