Pseudoduganella umbonata: FCL38_28235
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Entry
FCL38_28235 CDS
T06138
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00521
Streptomycin biosynthesis
mum00523
Polyketide sugar unit biosynthesis
mum00541
O-Antigen nucleotide sugar biosynthesis
mum01100
Metabolic pathways
mum01110
Biosynthesis of secondary metabolites
mum01250
Biosynthesis of nucleotide sugars
Module
mum_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FCL38_28235 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FCL38_28235 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FCL38_28235 (rfbC)
Enzymes [BR:
mum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FCL38_28235 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCP13882
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All DBs
Position
complement(6717877..6718422)
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AA seq
181 aa
AA seq
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MNVIPTPIDGLLIIEPTVFGDERGFFYESFNAQRFAELTGVQLPFVQDNHSRSARGVLRG
LHYQIQQAQGKLVRVTAGSVFDVAVDLRKSSSTFGQWYGLELSAENKRQFWIPPGFAHGF
TVTSEFAEFLYKTTDYYAPAYERSLLWNDPAVGVEWPVEGTPLLSAKDQKGLPLAEADVF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcattcctaccccgatcgacggcctgctgatcatcgaaccgaccgtgttcggc
gatgagcgcggctttttctacgagagtttcaatgcccagcgctttgccgagctgaccggc
gtgcagctgcctttcgtccaggataaccattcgcgctcggcgcgcggcgtgctgcgcggc
ctgcactaccagatccagcaggcgcagggcaagctggtgcgcgtgacggccggcagcgtg
ttcgacgtggccgtcgatctgcgcaagagctcgtccacattcggccagtggtatggcctg
gagctgtccgcggagaacaagcggcagttctggataccgccgggtttcgcacacggcttc
accgtcaccagcgagttcgccgaattcctgtacaagacaaccgactattatgcgccggcg
tacgaacgctcgctgctgtggaacgacccggccgtcggcgtcgaatggccggtcgaaggc
acaccgctgctgtcggccaaggaccagaaaggcctgccgctggctgaagcggacgtgttc
gaatga
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