Meriones unguiculatus (Mongolian gerbil): 110564214
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Entry
110564214 CDS
T05884
Symbol
Thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03013
Nucleocytoplasmic transport
mun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110564214 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
110564214 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110564214 (Thoc1)
03041 Spliceosome [BR:
mun03041
]
110564214 (Thoc1)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110564214 (Thoc1)
Spliceosome [BR:
mun03041
]
Complex C
Other components
EJC/TREX
110564214 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110564214 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
HsdM_N
Motif
Other DBs
NCBI-GeneID:
110564214
NCBI-ProteinID:
XP_060233666
LinkDB
All DBs
Position
2:complement(76558420..76605439)
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AA seq
657 aa
AA seq
DB search
MSPTPALFSLPEARTRFTKSTREALNNKNIKPLLNAFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPSDTKPTRVVRKRAAPE
DFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPLTGEQIESFANKLGEQWKILAPYLEIKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATADNLISALNKSGLSDLAESLTNDTETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccggcgcttttcagtttgcccgaggcgcggacgcggtttacgaaatct
accagagaggccttgaataataaaaatatcaagccattattgaatgccttcagtcagtta
cctggcagtgaaaatgaaaaaaaatgtactcttgaccaagctttcagaggtgttctggaa
gaggaaattataaatcactcagcgtgtgagaacgttttagctattatttctcttgctatt
gggggagtaactgaaagtgtctgtaccgcgtccacaccgtttgtgctattgggagatgtc
ttagactgccttcctttggatcagtgtgacacaatattcacttttgtcgaaaaaaatgtt
gctacctggaagtcaaatacattctattctgctggcaaaaattatttactacgtatgtgc
aatgatcttctcagaagattatctaaatctcagaatacagttttctgtggacgaattcaa
ctctttttggccaggctttttcctctatctgaaaaatcaggtcttaatttgcagagtcag
tttaacctggaaaacgtcactgttttcaatacaaatgagcaggaaagcaccttgggtcag
aagcatactgaggacagagaagaagggatggatgtagaagaaggtgaaatgggagatgat
gaagcccccactacttgctctattccaattgattacaacctgtatagaaaattctggtca
cttcaggattacttcaggaatcctgtacagtgctatgagaagatttcttggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttataaattagatgatactcaa
gcctctaggaagaaaatggaagaattgaaaacaggaggagaacatgtatactttgcaaag
tttttaacaagtgaaaagctgatggatttacaactgagcgacagtaactttcgtcgacac
atcctgttgcagtatctcattttatttcagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtc
taccaactgctttctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaatactgaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaccatcggataccaagcccacaagagtggtacggaagagagcagccccagaa
gacttcttaggcaaagggcccaacaagaagatcctgattggaaatgaggagctaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagagaatacatg
ccaactctggaggagttctttgaagaagccattgaacaagcagatccggaaaatatggtt
gaaagtgaatataaagctgtgaacaattcaaattatgggtggagagctctcagactctta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaagagcctgccagag
tatctggagaacatggtaataaagctagccaaggagctgccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttattgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctctaacaggagagcagatagagtcatttgccaacaaa
cttggtgaacaatggaagatcctggccccttacttggaaattaaagactctgaaattagg
cagattgagtgtgacagtgaagacatgaagatgagagccaagcagctcctcgtggcctgg
caagatcaagaaggagttcatgcaacagctgacaacctgattagtgcactaaacaagtct
ggattaagtgaccttgcagaaagtctaactaacgacactgagacaaatagttag
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