Microcaecilia unicolor: 115468048
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Entry
115468048 CDS
T09142
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
muo
Microcaecilia unicolor
Pathway
muo03013
Nucleocytoplasmic transport
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115468048 (UPF3A)
03015 mRNA surveillance pathway
115468048 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115468048 (UPF3A)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115468048 (UPF3A)
mRNA cycle factors
P-body specific factors
115468048 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
DUF5427
Motif
Other DBs
NCBI-GeneID:
115468048
NCBI-ProteinID:
XP_030055424
UniProt:
A0A6P7XY92
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All DBs
Position
4:complement(263949252..264049199)
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AA seq
437 aa
AA seq
DB search
MKSEKESLARAREKRLVELQFRAPPSPREQEQHPPCKGKEEKRAALTKVVIRRLPPTITK
KQLEEQLQPLPSHDYFEFCTADPSLYPHLFSRAYINFRNPDDIILFRDRFDGYVFIDNKG
QEYPAVVEFAPFQKFSKKKLKKKDAKAGSIEEDPEYRKFLESYCVDEEKICANPETLLGE
IEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEE
RRKRKEAEKQKKIAEKEIRIKLLKKPEKGDEQVTEKQKDKGDETEAEEVKWGKSSGSGNT
KSKPFESFVKELKEKSQNDSDKEQRDMERRFRDKEPERQRFRMDDSRKHRAHYEFEKFVR
RNEDELKWGKSYNQDRGKKGSHSYSFTVETVDKLGKEDKCDDMTSKKERIRNKDRPAMQL
YQPGAHNRTHTAPTNKT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgagaaggagtcgctggctcgggccagggagaagcggctcgtcgagctccag
tttagagctcctccatcgcctcgggagcaggagcagcacccgccctgcaaaggaaaggag
gagaagagagctgcgctcacaaaggtggttattcgtcgattgcctccaaccataaccaag
aagcaactggaagaacagttacaacctctgccttctcatgactactttgagttttgcaca
gctgatccgagcctttatcctcatctcttctcaagagcatatataaattttagaaatcct
gatgacatcattctttttagagatcgctttgatggatatgtattcatcgacaacaaaggt
caggagtatccagctgttgtagaatttgccccatttcaaaagttttcaaaaaaaaaactg
aagaaaaaagatgcgaaagcagggagcattgaagaagatccagaatacagaaaattttta
gaaagctattgtgttgatgaagagaaaatctgtgccaatcctgagactctgttgggagag
atagaagccaagacaagagaactcatagctcggcgaactacacctcttttggaatatatt
aaaaacaggaaattagaaaaacagagaatcagagaagagaaaagagaagagaggaggcgt
cgggagttggagaaaaaacgtctgcgagaggaagagaaaaggaagcgcagagaagaagaa
aggcggaaaagaaaggaagcagagaaacagaagaaaatagcagagaaagaaatcaggatc
aagcttcttaagaagcctgaaaaaggagatgaacaggtgacagagaagcaaaaagataaa
ggggatgaaactgaagctgaagaagtgaaatggggaaaatcttctggatctgggaacaca
aaatccaaaccttttgaaagttttgtaaaagaacttaaggaaaaatcacaaaatgatagt
gacaaagaacaaagggatatggagagaagatttcgagacaaagaaccagagagacaaagg
ttccgaatggatgacagcagaaagcacagagctcattatgagtttgagaagtttgtgcga
aggaatgaagacgagctgaaatgggggaaaagctacaaccaggacagagggaagaaaggg
agccacagctacagcttcactgtggagacagtagacaaactgggtaaagaggacaagtgt
gatgacatgacatccaaaaaggagcgcataagaaataaggatcgtccagccatgcagtta
taccagccaggagctcacaatcgaacacatacagcacctacaaataaaacctaa
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