Microcaecilia unicolor: 115476516
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Entry
115476516 CDS
T09142
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
muo
Microcaecilia unicolor
Pathway
muo03013
Nucleocytoplasmic transport
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115476516 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
115476516 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115476516 (THOC1)
03041 Spliceosome [BR:
muo03041
]
115476516 (THOC1)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115476516 (THOC1)
Spliceosome [BR:
muo03041
]
Complex C
Other components
EJC/TREX
115476516 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115476516 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
115476516
NCBI-ProteinID:
XP_030068795
UniProt:
A0A6P7YZV7
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All DBs
Position
1:complement(452016074..452147708)
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AA seq
656 aa
AA seq
DB search
MSPPFFSFPEARSRSTSSIRDALNNKTIKPLLATFNQLPGSENEKKCTLDQAFRGVLEEE
IVIHASPENFLAIISLAINGVTEGICTSSTPFVLLGDVLDCLPLDNCDRVFTFVEKNVTT
WKSNIFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEQESTLGQKHIEDKDEGMEGIEEGEMGDDETPTSCSIPIDYNLYRKFWSL
QDYFRNPVQCYDKSAWKTFLKYSDEVLSVFKSYKLDDTQASRKKLDELKAGGEHVYFAKF
LTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLLDEQSLWIEDTTKLVH
QLLCETPPVGDRFSKMIEHILNTEENWNAWKNEGCPSFVKERPVDPKPTRVVRKRPAPED
FLSKGNNKKIIMGNDELTRLWNLCPDNMDACKAESREYIPTLEEFFEEAIEQAVPENMVE
SEYKVVNNSNYGWRALRLLARRSPHFFQPTNQQFRSLPEYLESMVIKLAKELPPPSEEIK
TGEDDEEDNDALLKENSESPDVQHQKPVTGEQIESFANKLGEHWKILAPYLEMRDFDIRE
IESDSEDVHMRAKLLLVAWQDREGPNATPDNLIVALNNARLSDLAESLTNDTENDS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctccgttcttcagttttcctgaggcgcggagtcgctccacgagctccatcaga
gatgctttgaataacaaaaccatcaaacctttattggcaacattcaaccaactgcctgga
agtgaaaatgaaaagaagtgtaccctggaccaagccttcagaggggttctagaggaggaa
attgtaatccacgcatcccctgagaacttcctagccatcatttctcttgctataaatgga
gtcacagaaggtatctgcacatcatccaccccttttgtgctccttggagatgtccttgat
tgccttcctctcgataactgtgacagagtttttacttttgtggagaaaaatgttaccact
tggaagtctaatatattttattcagctgggaagaactacttactgagaatgtgcaatgat
ctcctgagaagattgtcgaaatcacagaatacagtgttttgtggaagaattcaactgttc
cttgctcgattatttccactgtctgagaagtcaggcctgaatttgcagtctcagtttaac
ctggaaaatgtcactgttttcaataccaatgagcaggagagcacactgggacaaaagcat
atagaagacaaagatgaaggaatggaagggatagaagaaggtgaaatgggagatgatgaa
acacctacaagctgctccattcctatagactacaacctgtacagaaagttctggtcactc
caggattacttccggaatcccgtgcagtgctatgacaagagtgcctggaaaacatttctc
aagtattcggatgaggttttgtcagtgtttaaaagctacaagctggatgatacgcaggct
tccagaaagaagctggatgagctgaaggcaggaggagaacatgtgtattttgctaagttc
cttactagtgaaaagctcatggatttgcagctaagtgacagtaactttcgccgccacatc
ctactgcagtatctgatattgttccagtatctgaagggacaagtcaagttcaaaagttcc
aactatgttcttcttgatgaacagtctctctggatcgaggacactacaaaactagtccat
cagctgctttgtgaaacccctccagttggagacaggttttccaaaatgatagagcacata
ttgaacactgaagaaaactggaatgcatggaaaaatgaaggctgtccaagttttgtgaag
gaaaggcctgtggaccccaagcctacaagagttgtaagaaaacgaccagctcctgaggat
ttcctgagcaaaggaaacaacaagaaaattatcatgggaaatgatgaattgacacgactt
tggaatctgtgccccgacaatatggatgcatgtaaagcagagagcagggaatatattccc
accctggaggagttctttgaagaagccattgaacaggctgttcctgaaaacatggtcgaa
agtgaatacaaggtggtgaataattcaaattatggctggcgagcactgagacttttagca
cgcagaagtccccacttcttccagccaactaaccagcagttccgaagtttgccagaatat
ctagaaagtatggtcatcaagttggccaaggagttgcctcctccttctgaagagatcaag
actggtgaagatgatgaggaagacaatgatgctttgttaaaggagaacagtgaaagccca
gatgtacagcaccaaaaacctgtgactggggagcagattgaatcatttgcaaataaattg
ggagagcactggaaaattctggccccttacttggagatgagggacttcgacattcgagag
attgagtcagacagtgaagatgtacacatgagggcaaaattgctgctcgttgcttggcag
gaccgagaggggccaaatgcaaccccagacaaccttattgttgccttgaataatgctcga
ttaagtgaccttgcagaaagcttgacaaatgacacagaaaatgatagttaa
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integrated database retrieval system
