Mucilaginibacter sp. PAMC 26640: A0256_08160
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Entry
A0256_08160 CDS
T04335
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mup
Mucilaginibacter sp. PAMC 26640
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mup03009
]
A0256_08160
Enzymes [BR:
mup01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
A0256_08160
Ribosome biogenesis [BR:
mup03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A0256_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
Met_10
PrmA
Methyltransf_11
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AMR31401
LinkDB
All DBs
Position
1902195..1903631
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AA seq
478 aa
AA seq
DB search
MGRSGKPRVNKVFENVTVIDIAEEGKGVGKADDFVLFIEKAIPGDVADVEVYRSKKNFGE
AKITRLIQPSEYRTTPFCEHFGTCGGCKWQHMTYDAQLKFKQKAVHDALTRLAKIDVEHM
DAIVPSPADRYYRNKLEYTFSNKRWLYDGENREDEALDMNALGFHIPGRFDKILNINHCY
LQAEPSNDLRNSINQYAKEQGISYYDVRQHTGALRNLIIRTSSTGEIMVIVVFAHADEEQ
VANLMTFVDTRFPQITSLLYILNTKMNDTIFDQEVKSWKGPEYIHEEMPGGNGKAIRFRV
GPKSFYQTNSIQALKLYEITRDFAGFKGDELVYDLYTGAGTIANFIAGHVREVVGVEYVP
TAIEDAKVNSEINNITNTKFFAGDMKDVLVADFVAEHGKPDVIITDPPRAGMHADVVARL
MEIEAPKIVYVSCNAATQARDLVVLKEKYDTVKIQPVDMFPHTQHVENVVLLKLREVL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggcagatctggtaaaccacgggtaaataaagtttttgagaacgttacagtaatagac
atcgctgaagaaggcaaaggtgttggcaaagcagatgattttgttttgtttatagaaaaa
gccattcccggtgatgtggccgatgtagaggtttaccgcagcaaaaagaatttcggcgag
gcgaagatcacccgtttaatccagccttccgaataccgtaccaccccgttttgcgaacac
tttggcacctgcggcggttgcaaatggcaacacatgacctatgatgcccagttgaagttt
aagcaaaaggccgtacacgatgcccttacccgcttggctaagatcgatgtggagcatatg
gatgccattgtaccatccccggccgatcgctattaccgcaataaactggaatatacattc
tccaacaaacgctggctatacgatggcgaaaaccgggaagatgaagcgctggatatgaat
gcgctcggtttccacattcccggccgttttgataagatcctgaatattaatcattgttac
ctgcaggccgaaccatctaacgatctgcgcaatagcattaaccaatatgccaaagagcag
ggtatcagttattacgatgttcgccagcatacgggcgcattgcgtaatttgatcatccgt
acctcgtctaccggggagatcatggtgatcgtagttttcgctcacgcagatgaagagcag
gtggctaacctgatgacatttgtggatacgagattcccgcagatcacatctttgctgtat
atcctcaataccaaaatgaatgataccattttcgaccaggaggtgaaaagctggaaaggc
cccgagtatattcacgaggaaatgccaggtggaaatggcaaggcgatccggttcagagtt
ggccctaagtcgttttatcaaaccaactctatccaggctttgaaactgtacgagatcacc
cgcgactttgccggatttaaaggcgatgagttggtgtatgacctttataccggtgccggt
accatcgcgaactttattgccggccatgtgcgcgaagtggtaggggtagagtatgtacct
accgctattgaagatgccaaagtaaactcggagatcaacaacattaccaataccaaattc
tttgccggcgatatgaaggatgttttggtggcagattttgtggccgagcatggcaaaccc
gatgtgatcatcaccgacccgccgcgggccggcatgcacgccgacgtagttgcccgacta
atggaaattgaagcccctaaaattgtttacgtaagctgcaatgccgccacccaggcccgc
gacctggtcgtgttaaaagagaaatatgatacggtaaaaattcagccggtggatatgttc
ccgcacacccagcatgtggagaacgtggtgctgttaaagctaagggaggttttgtaa
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