Musa acuminata (wild Malaysian banana): 103982252
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Entry
103982252 CDS
T03447
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103982252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
103982252
Spliceosome [BR:
mus03041
]
Complex A
U1 snRNP components
U1 related factors
103982252
Complex B
103982252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
103982252
NCBI-ProteinID:
XP_009397407
UniProt:
A0A804HP27
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All DBs
Position
1:8009547..8032149
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AA seq
1034 aa
AA seq
DB search
MASNPQSSGTQPFRPAVVGPAGPPQNFVPPMPMQFRTLVPPTHQFVPAACQPFRPVAQGM
PGPNVAMPTGQTQMPHFPQSQHLPPISGQPGQVLPSSQAIPLPYVQASRPIISGSLPPQQ
NAQVTSNVPNFPSLGMPLSSSYTFMTSYGQAPNSINAPSQFQPASMMQTPAPLVAQPWSM
PGTQSMPLVAPLIQTAQLPAAAAVMAPAQTVQPSSTEQMSSDWQEHTSADGKRYYYNKKT
RQSVWEKPLELMTPTERADASTDWKEFTAADGRKYYYNKVTKQSKWTMPDELKLAREQAE
KSATQPAPKETGTTVVSVASSVPSVETPSASALALNGPAAVSNAMQLPVDSGTQPPATSV
APSSIAVVTSAGINSSSSVGTENTVGVSNHHAPLTPVITPASASSEFPSLSVDAPTAAIN
SNQDSSSLTDSASVPDEISAQDLEEAKRTIPVVEKTNFTQLEDKMVDEGQFVYANKLEAK
NAFRALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERR
IKQKKAKEDFTRMLEECKELSSMTRWSKAITMFEDDERFTAVERSREREDLFEGYIAELQ
KKERAKAAEAHKRNIMEYRAFLESCDFVKANSQWRKVQDRLESDERCSRLEKIVRLENFQ
EYVRDLEREEEEQRKMQKEQLRRVERKNRDEFRKLMEEHVAAGVLTAKTHWRDYFTQVKD
LSPYLAISSNTSGATPKDLFEDVTEELEKQYHEDKAQIKDAMKIGKITLASSWTFEDLKT
AVAGIDSLRGISEINLKLVFDELLERVREKEDKDAKKRQRLADNFSDLLYSIKEITAFSN
WEQCRSLFEDSQEYRSIGDDNFGREVFDGYVAHLQEKLKEKERKREDEKAKKEKEREEKE
KRKEKEKKEKEREREKEKGKDRARKDEIESDIIDVMDSHSSKDKKRDKDKERKHRKHHHT
KADDISSDKDQKEESKKSRRHSSDRKKSRKHAYASDSDTENRHKRHKKDRDGSRSNDGYE
ELEDGELGEDGEIR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatccacagtcctctgggacacagccttttaggcctgcagtagtggggcct
gctggcccacctcaaaattttgtcccccctatgcctatgcagtttcgaacattggttcca
ccaacgcatcagtttgtcccagcagcctgtcagccattccggcctgttgcacaaggaatg
cctggaccaaatgttgccatgcctactggtcaaacacaaatgccccattttcctcaatca
cagcatttgcctccaatatcaggccaaccaggtcaagtgctgccatcatcacaagcaatt
ccattgccgtatgttcaagcaagtagacctattatatctgggtcattgccacctcaacag
aatgctcaggtgacaagcaatgtgcctaattttcccagtttaggaatgcctctttcttca
tcttatacgttcatgacatcttatggtcaggcaccaaatagtataaatgctccatcccag
tttcaaccagcatcaatgatgcagactcctgcccctttagtagcacaaccctggtctatg
cctggaactcaaagcatgcctcttgttgcccctttgatccaaactgcacagctacctgca
gctgctgctgtgatggctccagcacaaactgtccagcctagctctactgaacagatgtct
tctgattggcaagaacacacatctgcagatggtaaaaggtattattataataagaagacc
aggcaatctgtctgggagaagccacttgagttaatgacacctactgagagggcagatgca
tcaactgactggaaggaattcactgctgcagatggtcgaaaatactactataacaaagtc
acaaagcaatccaaatggacaatgcctgacgagctcaagctagctcgagaacaagcagag
aagtctgcaactcagccagcaccaaaagaaacagggaccactgttgtatcagttgcttca
agtgttccttctgttgagacaccttctgcaagtgctttggctcttaatggaccagcagca
gtatctaacgccatgcagttgccagttgattctggtacccaacccccggcgacctctgtg
gcaccatcatccattgctgttgtaacatctgctggcatcaattctagttcttctgtagga
acagaaaacacagttggtgtgtcaaatcatcatgcacctttaactccagtaatcactcct
gcttctgcgagtagtgaatttccttctctttctgtggatgctccaaccgctgcaattaac
agtaatcaagacagttcatcccttacagattctgcaagtgtgcctgatgaaatttctgct
caggatcttgaggaagctaaaaggaccattcctgttgttgagaaaactaatttcactcaa
ttagaagataaaatggttgatgaaggacagttcgtttatgctaacaagctggaggcaaaa
aatgctttcagggctttactggaatctgctaatgtggagtctgattggacttgggaacag
gcaatgagggttatcatcaatgataaaagatatggtgctttgaaaacacttggagaaagg
aaacaagcatttaatgagtacctgggccaaaggaaaaaacaggaggctgaggagaggcgc
atcaagcagaagaaagcaaaagaagacttcactagaatgctagaagaatgcaaggaactt
tcatcaatgactagatggagtaaagcgataaccatgtttgaagatgatgaacgatttact
gcagtcgagcggtcaagagagcgtgaggatcttttcgagggctatatagcggagctccag
aagaaggagagagcaaaggctgctgaggcgcataaaagaaacattatggaatatagagct
tttcttgaatcttgtgacttcgtcaaggcaaacagtcaatggagaaaagtccaagatcgt
ctggagagtgacgaaagatgttctcgacttgaaaagattgttcgattggagaattttcag
gaatatgttcgtgatctggagagagaggaggaggaacagaggaagatgcaaaaggaacag
ttacgacgtgtagagcgcaaaaaccgtgatgagtttcgtaagttgatggaagaacatgtt
gctgctggagttcttacagctaaaactcactggcgtgattatttcacacaggtcaaagat
ttgtctccttacttggcaatatcatcaaatacatcaggtgcaacacccaaagatctgttt
gaagatgttactgaggaacttgagaagcagtatcacgaggacaaggctcaaattaaagat
gcaatgaagatcggaaaaattacattggcttcatcatggacatttgaggacttaaagact
gctgttgcaggtattgatagtttgagaggaatatctgagataaacttgaagctggtattt
gatgagttactggaaagagttcgggaaaaggaggataaagatgctaaaaagcgccaacgt
cttgcagataatttctctgatctgttatactcgatcaaggaaataactgcattttcaaat
tgggagcaatgcagatcactttttgaagacagtcaggaatataggtcaattggtgacgac
aattttggaagagaggtttttgacgggtatgttgctcacttgcaagaaaaattgaaagag
aaagaacgcaagagggaagacgaaaaggcaaaaaaagagaaggaaagagaagagaaagaa
aaaaggaaggagaaagagaaaaaggaaaaagagagagaacgtgaaaaagaaaaaggaaag
gatcgggctagaaaggatgaaatagagagtgatatcattgatgtgatggatagccatagt
tcgaaggataagaaacgggacaaagacaaagaaaggaaacaccgtaaacatcatcacacc
aaagcagatgatataagctctgacaaggatcagaaagaggagtctaagaagtccaggaga
catagtagtgaccgaaagaaatcccgaaagcatgcttatgcttctgattctgatactgaa
aatcggcacaagaggcataagaaggatagagatggatctcggagtaatgatggttatgaa
gaacttgaagatggagaacttggcgaagatggggaaatccgttag
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