Musa acuminata (wild Malaysian banana): 103983894
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Entry
103983894 CDS
T03447
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103983894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
103983894
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
103983894
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
103983894
NCBI-ProteinID:
XP_009399523
UniProt:
A0A804HSB9
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Position
1:12425087..12433695
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AA seq
692 aa
AA seq
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MARNKESLVLLIDVGPSIHSVLQDVEGVCSMLVQKKLIFSKSDEVGIVLFGTEDTNNELE
KEVGGYEHVAVLRDIRVVDDDAVVVLKNLPKGTFPGDFLDAIVVGMDMLIKKFGVSDKGK
KRLYLITDARFSTKEPYEGTKEDQVDTISQQMKVLGIRLNCLIIREKICSTEHLGAIDEN
DKLLDQFSRKAMAKTVHVDCATSLLGAIKTRNVVPVTVFRGDLELSSMMKIKVWVYKKTS
EEKFPTLKKYSDKAPASDKFATHEVKVDFEYKSSQDPDKVVPPEQRIKGYRYGPQVVPIS
SAEWEAVKFKSEKGVKLLGFTDVSNILRHYYMRDVYIFIPEPGNTKAIIAVSALAKAMKE
MNKSAVLRCVWRQGQGNVSVGVLTPNLSSIDNIPDSFYFNILPFAEDVREFQFPSFSSFP
SSWQPDQHQQEAADDLVRMLDLAPFDRKEVLQPDYTPNPVLERFYQFLHLKSKAPEIDVP
QLDRSLKRIAEPDPDFLSRHNSIINNFQERFELKENPKKKKLSRQAWREKPSASNDEKVG
VDGVVPKVQSSSLKKSLSSLEVEKIGDLNPVQDFEAMMARRDSSKWITEAIKDMQHYIYH
LLENSYEGNSYPKAIECLMALRKGCILEQEPKEFNRFMLDICKKFRRSDLADFLELLYSK
KIPLISKSEAADSDLTEEEAKNLPIKMEDSSE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacaaggagtcgctggttttgctgattgatgttggtccctcgatacatagt
gttcttcaggacgtcgaaggtgtttgctcaatgctcgtgcaaaagaagttaatttttagt
aagagtgatgaggttggaattgttctgtttggaactgaagatactaacaatgagcttgag
aaagaagtgggtggatatgaacatgtggcggttctacgtgatattagagttgtagatgat
gatgcagtggtggttttgaaaaatcttcccaaaggaactttccccggtgattttttggat
gccattgtggttgggatggatatgctgatcaagaaatttggagtttcagacaaaggaaaa
aaacgtctttatctcattactgatgcacggttttctactaaagagccttatgaagggaca
aaagaagatcaggtcgacactatctctcaacagatgaaagttcttggaataaggctaaat
tgtctgatcatcagagaaaaaatatgtagtactgaacatctgggagcaattgatgagaat
gacaaactcttggatcaattctcaaggaaagcaatggcaaagacagtacatgttgattgt
gcaacatcattgctgggtgctatcaaaacacgaaatgtagtccctgtcacagtattcaga
ggagacttggaactaagctcaatgatgaaaatcaaggtatgggtatataaaaagacatcc
gaagagaaatttcctacattaaaaaagtattctgataaagcgcctgcaagtgataagttt
gctacccacgaggttaaagtggattttgaatataaaagttcacaggatcctgataaagtt
gtccctccagaacaaagaattaaaggttatcgttatgggccacaagtagttcctatatca
tctgccgaatgggaggcagtcaagtttaaatctgagaagggtgtcaagcttttaggattc
acagatgtttcaaatattttgcggcactattatatgagggatgtgtacatctttattcct
gaacctgggaacacgaaagcaattattgcagtttcagctttggctaaagcaatgaaggaa
atgaataagtctgcagttttgcggtgcgtatggagacaaggtcaaggaaatgtttctgtt
ggggtattgacacctaatttatcttccatagataacattccagattcattttacttcaac
atacttccttttgctgaggatgttcgagagttccagtttccttcctttagcagtttccca
tcatcatggcagccagatcaacatcagcaggaagcagcagatgaccttgttaggatgtta
gaccttgcaccttttgatagaaaagaagtgcttcaacccgattatactccaaacccagtt
ttggagagattttatcagtttcttcacctgaagtcaaaggctccagagatagatgtacct
caactcgacagaagtctaaagcggatagctgaacctgaccctgatttcctctcaagacac
aactctattattaacaattttcaggaacggtttgagctgaaggagaacccaaagaaaaag
aagctgtctagacaagcatggagggaaaaaccatcagcttcaaatgatgagaaagtgggt
gttgatggtgtggttcctaaggttcagagttctagtttgaaaaaaagcttatcttcatta
gaggtagaaaaaattggggatttgaatcctgtccaagattttgaagctatgatggcacgc
agagacagttcaaagtggatcacagaagcaattaaagatatgcaacattatatttatcac
ctgttagaaaattcttatgaaggaaattcctaccccaaggcaattgaatgtttgatggca
cttcgtaaaggctgtattcttgagcaggagccaaaggaatttaaccgatttatgcttgat
atttgtaagaaatttcggagatctgacctagctgactttcttgagcttctttattcgaaa
aagataccattgatcagcaaaagtgaagcagccgacagtgatctaacagaagaggaagct
aaaaacctcccaatcaagatggaggattcttcggagtag
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