Musa acuminata (wild Malaysian banana): 103993936
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Entry
103993936 CDS
T03447
Name
(RefSeq) G patch domain-containing protein TGH homolog isoform X1
KO
K13123
G patch domain-containing protein 1
Organism
mus
Musa acuminata (wild Malaysian banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
103993936
Spliceosome [BR:
mus03041
]
Complex C
Other components
Complex C specific factors
103993936
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GFIT
Motif
Pfam:
DUF1604
Surp
G-patch
Motif
Other DBs
NCBI-GeneID:
103993936
NCBI-ProteinID:
XP_009412451
UniProt:
A0A804K2G9
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All DBs
Position
8:2451487..2470058
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AA seq
1094 aa
AA seq
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MAMDEDEEDFVFYGTPIEREEDTSARKRKAVADAGQLRSLPLWKQEVRDEEGRRRFHGAF
TGGFSAGYYNTVGSKEGWTPQTFSSSRKNRAEVKQQSIYNFLDEDDLKGMGGQALETSMQ
FDTFGFTAAEFARKEVEKDQLKRPSAIPGPVPDEIVIPASNSIGVKLLLKMGWRHGHSIK
DTHSDSLYEARREARKAFLAFSGNEGGAKTAKEGSHAWDSEEYAERVNNGLYTSKSMPEY
VLQPKQDLYGLGYDPYKHAPEFRDKKRLRESKRKNHGIKSSVRGNLLSSNSGKYAPGFGI
GALEELDFEDEDIYASGFDFEQTEVDEDEPVQMIRDNIYRLEDKKNDCLPGFKVASSPDY
TIERFHPPVIPVNFDPHHKFSAPLESATTIAELPPPEVPPPEDNNLKLLIDGFATLVARC
GKIFEDLSKEKNRSNPLFYFLSGGDGHNYYERKLWEEKQKSVNHLRLVEDSKSKSSTRTM
TAESRGRILGEKKLERTSNETSSAVAVKEFINLQSNLADTFTKPVSLVGLLEIAKPFKDD
PAKQERFEQFLKDKYQGGLRSTQPSGIMSENDRARERLDFEAAAEAIEKGKKLIASSSMD
QFTALSGVVDQQFIASTGLTKHQIPRDEDKLTNKLYPKREEFQWRPLPILCKRFDIIDPF
MGKPAPLPRPKSKMETLIFMTESIKDVKSEETNTIRKDFMHISHSESNVAEKQLDSKEPE
IEQSSASVQKPVDLYKAIFSDDSDDDGDDSSSTKVADPVKKSEGANMTLNRLVAGDFLES
LGKELGLEVPADVSGKPFKGNGSSNITETACAGEIKIPEKNERTIFPLETHEAPPETDVM
ASQQRFPGSTRNTTPTGISATGLSSFARDGDDHDNGCKESADKFVSGSAGGRFSDFHKEE
VDAEKTRSQARNNRSHSRYHDGRSSPDTGSSSGHQQLKKSATHTRLQRRRSRTPDTHSDG
DGYQPKRNKSHSGHRWRIRTPDADFSDDEYQQRESRSHSRHHQRSRTPETDSSSDPQDHF
QSTSRSKKLHRHERRKKHSGHSKRKKRTSPTRDSGYDKGRDAREDDVRDQKPSDLKHTSH
SKSEHHKSHHRGRR
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggacgaggacgaggaggacttcgtcttctatggcacaccgatcgagcgggag
gaggacacatccgcccggaagaggaaggccgtcgccgacgccggccagctacggagcctt
cccctatggaagcaagaggtccgagatgaagaaggacgcagaagatttcatggtgcattt
actggaggattttctgctggttactacaatactgttggttcaaaagaaggatggactcct
cagacttttagttcttcacgtaaaaatagagctgaggtgaaacaacagagtatatataac
tttctagatgaagatgacttaaagggtatgggaggccaagcattggaaacatctatgcaa
tttgatacatttggttttactgctgctgaatttgctcgaaaagaagttgagaaagatcaa
ctcaaaaggccatcagctattccaggaccagtacctgatgaaatagttattcctgcatca
aattctattggtgtaaagctattgctcaaaatgggatggcgccatggtcattcgataaag
gatacacattctgattcattatatgaagcacgcagagaagctaggaaagcatttcttgct
ttttctggtaatgagggtggagctaaaacagctaaagaaggatcacatgcatgggattct
gaagaatatgctgaaagagtgaacaatggcctatacacttcaaaaagcatgcctgagtat
gtcctgcagccaaaacaggacttgtatggattgggttatgatccatacaagcatgctccg
gaatttagagacaaaaaaagattgcgtgagtctaaaagaaaaaatcatggtattaaaagt
tcagtgagaggaaatcttttatcttctaactcaggaaaatatgcgccgggctttggtatt
ggagcattagaagaacttgattttgaagatgaggacatttatgcatcaggttttgacttt
gagcaaactgaagttgacgaggatgaacctgtgcaaatgatcagagataacatatacaga
cttgaagacaaaaaaaatgactgtttgcctggttttaaggttgcatcaagtcctgactat
acgattgaaagatttcatcctcctgttatcccagtcaattttgatccacatcacaagttt
tctgcccctctcgagagtgcaacaacaattgctgaattacctccaccagaggttccccct
ccagaagacaataatttgaagttgttgattgatggctttgcaactttggttgctcgttgt
gggaaaatttttgaggacctttcaaaggaaaaaaacaggtcgaatcccttgttctatttt
cttagtggaggagatggccacaactactacgagaggaagttgtgggaagagaagcaaaaa
agtgtcaatcatttaaggctggtggaggactctaagtcaaaatcatctactcggactatg
acagcagaaagccgtggtagaattttgggtgagaagaagttggagagaacctccaacgag
accagctcagcagttgctgtcaaagaatttattaatctgcagtccaatcttgctgataca
ttcaccaaaccagtatctcttgttggattattagaaattgcaaaacctttcaaagatgat
cctgctaagcaagagaggtttgagcaatttctcaaggacaagtatcaaggaggtttacgt
tctacacaaccttcagggatcatgtcagagaatgacagggctcgtgagaggttggatttt
gaagctgcagctgaagcaattgaaaagggcaaaaaattaatagcttcttcatcaatggat
cagtttacagctttatcaggagttgttgatcaacagttcatagcatcaactggcctaaca
aaacatcaaattcctcgagatgaagataagttgacaaacaaactttatccgaagagggag
gagtttcagtggcggcctttgcccattctatgcaaacggttcgacattatagacccattc
atggggaagccagcacctttgccaagacctaaaagcaagatggaaacactcatctttatg
acggagtctataaaggatgtgaagtctgaagagaccaatactatcagaaaagatttcatg
cacatatctcactcagaatccaatgtggcagagaaacaacttgactccaaagagcctgag
attgagcaaagcagtgcaagtgtgcagaagccggttgatctgtataaggcaatcttctct
gatgattcagatgatgatggggatgatagtagttctaccaaggtggctgatcctgtgaag
aagagtgaaggtgccaacatgaccctaaaccgtttggttgctggagattttttagaatct
ttaggtaaagagctaggtctggaggttccagctgatgtatccggcaaacctttcaagggt
aatggttcatcaaatataacagaaacagcttgtgctggagaaatcaaaattcctgaaaag
aatgaaagaactattttcccactggaaacccacgaggcacctccagagactgatgttatg
gcttctcaacaaagatttccaggaagtaccagaaacacaacacctactggaatatctgct
acaggactttcttcttttgctagggatggtgatgatcatgataatggttgtaaagaaagt
gctgataaattcgtaagtggctctgccggagggagattttctgactttcataaggaagaa
gttgatgcagaaaaaacacgatcccaggccagaaataaccgaagtcactcgagatatcat
gatggaaggagttcgccagatactggctcttccagtggtcatcaacagcttaagaaaagt
gcaactcacacaaggcttcagcgacgcagaagcagaacccctgatactcattctgatggt
gatggatatcaacctaaaagaaacaaatctcattcagggcatcgttggaggatcaggact
ccagatgctgatttttctgatgatgaatatcaacaaagagaaagtagatctcattcaagg
catcatcaaaggagcaggactccagagactgattcttctagtgatccacaagatcatttt
caatcaacatccagatcgaagaagctgcatcgtcatgaaagacgcaaaaaacactctgga
cattccaagcgtaaaaaaagaacatctcctactagagactctggctatgataagggtagg
gatgctagagaagatgatgtacgggatcagaaacctagtgatttgaagcatacttctcat
tcaaaatcagaacatcacaaaagccatcatcgaggcagacgatga
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