KEGG   Flagellimonas oceani: GVT53_04565
Entry
GVT53_04565       CDS       T06500                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
mut  Flagellimonas oceani
Pathway
mut02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mut00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GVT53_04565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mut03021]
    GVT53_04565
Transcription machinery [BR:mut03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GVT53_04565
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_10 GerE DUF134 UPF0122 HTH_24 HTH_36 Terminase_5 HTH_23
Other DBs
NCBI-ProteinID: QII43973
UniProt: A0A6G7IZE2
LinkDB
Position
966216..966794
AA seq 192 aa
MFSIYHTYLDKGTPITDIRDKATYKKVFNLFYRELVVYAHNFLYNLQASEDLVQDVFIQL
WENSHELNIHTSIKSYLYASVRNKCYNRLRDIKIEDDLNLIDLNANLTSDYEMEGHEPQE
KQKVYQQVMDVVEEFPDNMKRIFQLKFFEDYKYADIAEEMGISINSVKTQLKRAKAKINE
AIAFIVFLLTYF
NT seq 579 nt   +upstreamnt  +downstreamnt
ttgttttccatataccatacgtatttggataagggcacacccattactgatatcagggac
aaagctacctataaaaaagtctttaatctattttatagggagttggtggtttatgcgcac
aattttctctataatctccaagccagtgaggacctggtccaagacgtctttatccaactc
tgggaaaattcccatgaattgaatatacatacttccataaagtcgtatttatatgcttct
gtacgaaataaatgctataatcgattaagggacataaagatcgaggatgaccttaatttg
atcgatttgaacgccaacctgacctccgattatgaaatggaaggtcacgaaccccaagaa
aagcaaaaagtctaccagcaggtgatggatgtggtggaagaatttcccgataatatgaag
cgaatattccagttgaaattctttgaagattacaagtatgctgatatagccgaggaaatg
gggatttccatcaactcggtcaaaacacagctcaaaagggcaaaggccaagataaacgaa
gcaattgcgtttattgtttttttgctgacctatttttag

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