Flagellimonas oceani: GVT53_04565
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Entry
GVT53_04565 CDS
T06500
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mut
Flagellimonas oceani
Pathway
mut02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GVT53_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mut03021
]
GVT53_04565
Transcription machinery [BR:
mut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GVT53_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_10
GerE
DUF134
UPF0122
HTH_24
HTH_36
Terminase_5
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QII43973
UniProt:
A0A6G7IZE2
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All DBs
Position
966216..966794
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AA seq
192 aa
AA seq
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MFSIYHTYLDKGTPITDIRDKATYKKVFNLFYRELVVYAHNFLYNLQASEDLVQDVFIQL
WENSHELNIHTSIKSYLYASVRNKCYNRLRDIKIEDDLNLIDLNANLTSDYEMEGHEPQE
KQKVYQQVMDVVEEFPDNMKRIFQLKFFEDYKYADIAEEMGISINSVKTQLKRAKAKINE
AIAFIVFLLTYF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgttttccatataccatacgtatttggataagggcacacccattactgatatcagggac
aaagctacctataaaaaagtctttaatctattttatagggagttggtggtttatgcgcac
aattttctctataatctccaagccagtgaggacctggtccaagacgtctttatccaactc
tgggaaaattcccatgaattgaatatacatacttccataaagtcgtatttatatgcttct
gtacgaaataaatgctataatcgattaagggacataaagatcgaggatgaccttaatttg
atcgatttgaacgccaacctgacctccgattatgaaatggaaggtcacgaaccccaagaa
aagcaaaaagtctaccagcaggtgatggatgtggtggaagaatttcccgataatatgaag
cgaatattccagttgaaattctttgaagattacaagtatgctgatatagccgaggaaatg
gggatttccatcaactcggtcaaaacacagctcaaaagggcaaaggccaagataaacgaa
gcaattgcgtttattgtttttttgctgacctatttttag
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