Massilia varians: MasN3_22330
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Entry
MasN3_22330 CDS
T08769
Name
(GenBank) beta-galactosidase
Organism
mvar
Massilia varians
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Glyco_hydro2_C5
Big_1
BetaGal_gal-bd
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
BDT58739
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Position
2494368..2496704
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AA seq
778 aa
AA seq
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MIVFDSAGAGLLRKLAGAALMTWFTMLGAAQARTIDLNGGWLFHRDDSRRAAGIEQVPAD
GWTRVDLPHAARIEPRVPTAPWQGTVFYKKHIKLDLRPGERAILRFEGVMNVADVWLNGK
HLGQHLGGYLPFAFDVTDILAGGGEGELVVRANNEDNPITGPKPLKDLDYIQHGGIYRGV
SLAIKPPVHVTDAMLSDTPGGGGIFVTTPRADKRAAVVRVQAEIMNTSNSAQAVSVRHTL
AWRGRQVARVEQQLQLAAGERRHVSIPLKLAQPKLWSPKAPNLYHLETRVLAAGREDLVR
TRIGVRRLAFEGGKLLLNGEPLHLRGVNRHQEYPYVGYALSAAADLRDALLIKKYGFDYV
RLSHYPQSPAFMAAADELGLMVLPAIPGWQFHNPDPAFARQVIRTCADMIRRDRNHPSVL
AWECSLNESRMPDALVQALHDTVHAEYPGDQAFSAGWVPQTYDIYLQARQHRIGNKHALP
NKPLIVSEYGDWEYYAMNAGFNQGAWADLKPADRSSRQALGAGEARLAQQARNVAEAHDD
NVATPAFADGYWVMFDYARGYAPDLEESGAFSIERLPKFSAEFFRSQRDAADASPRWGGG
PMVFIASYWQADSAPRVRVFSNAEEVELRLNGKLVGRKQGRPSPSHPRLAHPPLEFDTGG
FAPGELVARAYSSGRVVAEHRVRTPGAPVRLALALDDMGVPAAKGDLVFVRARLLDAAGT
TVPVSGREVAFSAGPGTEIVGSAQVATEAGIASVLVRVQGPRASLTARTGGLSGALAP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgattgttttcgattccgcgggcgcagggctgctgcgcaagctggcgggcgccgccctg
atgacgtggttcaccatgctcggggccgcccaggccagaaccatcgacctgaacggaggc
tggctgttccaccgcgacgacagccgccgggccgccggcatcgagcaggtccccgctgac
ggctggacccgggtcgacctgccgcatgcggcgcgcatcgagccgcgggtgccgaccgcg
ccctggcagggaacggtgttctacaagaagcacatcaagctcgacttgcgtcccggcgaa
cgcgccatcctgcgcttcgagggcgtgatgaacgtggccgacgtctggttgaacggcaag
cacctgggccagcacctgggcggctacctgccgttcgccttcgacgtgaccgacatcctg
gccgggggcggcgagggcgaactggtggtgcgcgcgaataacgaggacaatccgatcacc
gggccgaagccgctcaaggacctcgactacatccagcacggcggcatctaccgcggcgtc
tcgctcgcgatcaagccgccggtgcacgtcaccgacgcgatgctgtcggatacgccgggc
ggcggcggcatcttcgtcaccacgccccgggccgacaagagggcggcggtggtgcgggtc
caggccgagatcatgaatacgtcgaacagcgcgcaggcggtgagcgtgcgccataccctg
gcctggcgcggccggcaggtggcccgggtggagcagcagctgcagctggcggcgggcgag
cgccgccacgtgagcatcccgctgaagctcgcccagccgaagctgtggtcgccgaaagcg
ccgaacctgtaccatctggaaacgcgggtgcttgctgccggccgcgaagacctggtgagg
acccgcatcggcgtgcgccgcctggccttcgagggcggcaagctgctgctcaatggcgag
ccgcttcacctgcgcggcgtgaaccggcaccaggaatatccctacgtcggctatgcgttg
tcggcggcggcggacctgcgagacgccctcctgatcaagaaatacggcttcgactacgtg
cgcctgtcgcactatccgcagtcgcccgccttcatggcggcggccgacgaactgggattg
atggtgctgccggcgatcccgggctggcagttccacaatcccgaccccgcctttgcgcgc
caggtgatccgcacctgcgccgacatgatccggcgcgaccgcaaccacccgagcgtgctg
gcctgggagtgctcgctgaacgagagccggatgccggacgcgctggtgcaggccctgcac
gacacggtgcatgccgaatatccgggcgaccaggccttctcggccggctgggtgccgcag
acctatgacatctacctgcaggcgcgccagcacaggattggcaacaagcatgcgctcccg
aacaagccgctgatcgtgtccgaatacggcgactgggaatactacgcgatgaacgccggc
ttcaaccagggcgcctgggccgacctgaaacccgccgaccgttccagccgccaggcgctg
ggcgctggcgaagcgcgcctggcgcagcaggcgcgcaacgtggccgaggcccacgacgat
aatgtcgctaccccggccttcgcggacggctactgggtgatgttcgactatgcgcgcggc
tacgcgccggatctcgaagagtcgggggctttcagcatcgagcgcctgcccaagttctcg
gccgagttcttccgctcgcagcgcgatgcggcggacgcctcgccgcgctggggcggcggt
ccgatggtcttcatcgccagctactggcaggccgattccgcgccgcgggtgcgcgtgttc
agcaacgccgaggaagtcgagctgcgcctgaacggcaagctggtcgggcgcaagcaaggc
cggccgtcgccttcgcacccgcgcctggcgcatccgccgctcgaattcgacaccggcggc
ttcgcgcccggcgaactggtggcgcgcgcctattcgagcgggcgcgtggtggccgagcac
cgcgtgcgcactcccggcgcgccggtgcggctggccttggcgctggacgacatgggcgtg
ccggcggcgaagggcgacctggtcttcgtacgcgcccgcctgctcgacgccgccggcacc
accgtgcccgtgagcggacgcgaagtggccttcagcgccggtccggggaccgagatcgtc
ggcagtgcgcaggtggccaccgaggccggcatcgccagcgtgctggtgcgcgtccagggg
ccacgggcgtcattgacggcccggacgggtggcttgagcggcgctctcgcgccatga
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