Massilia varians: MasN3_41100
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Entry
MasN3_41100 CDS
T08769
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mvar
Massilia varians
Pathway
mvar00521
Streptomycin biosynthesis
mvar00523
Polyketide sugar unit biosynthesis
mvar00541
O-Antigen nucleotide sugar biosynthesis
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01250
Biosynthesis of nucleotide sugars
Module
mvar_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MasN3_41100 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MasN3_41100 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MasN3_41100 (rmlC)
Enzymes [BR:
mvar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MasN3_41100 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
BDT60616
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Position
complement(4589659..4590204)
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AA seq
181 aa
AA seq
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MKMTPLAIPEVLLVEPRVFGDERGFFFESFHQARFEEAVGRKVEFVQDNHSKSARHVLRG
LHYQMQQTQGKLVRVVAGSVFDVAVDLRRSSPTFGQWVGEILSAENKAQLWVPEGFAHGF
VVLSESAEFVYKTTDYYAPEHERSIVWNDPTLAIDWPLQAAPIVSAKDEKGMPFLAADLF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgactcctttggctattcctgaagtcttgctggtcgagccacgcgtgttcggc
gacgagcgtggcttcttttttgagagttttcatcaggcccggttcgaggaagctgtcggc
cgcaaggtggaattcgtacaggacaatcattcgaaatcggcccggcacgtcctgcgcggc
ctgcactatcaaatgcagcaaacccagggcaagctggtgcgcgtggtggcgggcagcgta
tttgatgtagcggtcgacctgcgccgttcgtcaccgaccttcggccagtgggtcggagaa
atcttgagtgcagagaacaaggcgcagctatgggtgccggaaggcttcgcccatgggttc
gtggtgctgtcggaatcggcggaattcgtgtacaagacgacggactattacgcacccgag
cacgagcgcagcatcgtctggaacgatccgacgctggcaatcgactggccgctgcaggcc
gcaccgatcgtctcggccaaggatgaaaaagggatgcccttcctcgcagccgatctgttc
gattga
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