Methanosarcina vacuolata: MSVAZ_3491
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Entry
MSVAZ_3491 CDS
T03815
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
mvc
Methanosarcina vacuolata
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AKB45760
UniProt:
A0A0E3QA92
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Position
complement(4475456..4478296)
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AA seq
946 aa
AA seq
DB search
MKHPLIKSDTVEQRLYQLNLAGKALEGSSLVVLPTGLGKTVIALFVIVSRLQRFGGKVLI
LSPTKPLVEQHAAFFKKVMALPEDEVLTFTGSIAPAEREKLWAQGKLIVSTPQVIENDLL
TKRISLEDVTHITFDEAHRAVGNYAYTFIAEKYFESARNPHVLGITASPGSSDEKISEVC
QALHIENVSVKTEKDKDVRPYVQEKEIEWLQVQLPPEMAEIRSYLEKIFDDRLITIRGLG
FSPGSGKYVSKKDLLLFQKKLQGEIRVGGDPAVFTAMSVLAEMVKVNHAVEMIETQGLEP
FRKYLEKLDAEASSSSASKASKRLMDDLYMRKALYRAKECEVEHPKLELARKLVSEQLKE
SPDSRVIVFTNYRDTAEIVVNALSEVPGIAPIRFVGQASRLKDKGLTQKQQVEVLDKFRA
GEYNVLVATSVAEEGLDIPSTDLVLFYEPIPSEIRSIQRKGRTGRQHKGRVIILVTKGTR
DEAYYWSSKSKEKKMLNSMHGLEALLVPKNSKQGSKLSDFESEAFIPDYAQNDAESETKT
GNRLENADVMQGNKGPIQGNKDPMRGNKGPMRGNKGPMQESSDLAVNLSGFVNSRGKAVD
GNVFPDNKDAAVDSSSFAGIGGRSSDIRDLTVDSGELTVDSRDMAAGPDCNRANEEINED
NRGVGKEEKSGEENSREENSREGKSRDEKSREENVKERQKTFVYFETLSGKKPESAPETT
AEASKIEINPESLKMVVDFREAKSGVANVLDKLGVEVIFTTLEIGDYVVSDRLAVERKRT
DDFVNSLVDGKRNLFVQLSNLTRVYQKPVLIIEGTELFTSRQINPNAIYGSLISIAIDFG
VSLLYSRDEEETAAILKMLAKREQMENKREVNPHGKKSASTLIEQQEYLVSAIADIGPKA
ARNLLLHFGSVEAIMKADAKELKNVKLIGPKRATKIRELIEAPYKG
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacccgcttataaaatccgataccgttgagcagaggctttatcagttaaatctt
gcaggaaaagcccttgaaggatcaagtcttgttgttcttcctacagggcttggaaaaacc
gttatagctctttttgtaattgtttccagacttcagcggttcgggggaaaagtcctgatt
ctttctccaacaaaaccgcttgttgagcaacatgcagcttttttcaaaaaagtaatggcg
cttcccgaagacgaagttctcacttttactggcagtattgcacctgcagagcgtgaaaaa
ctctgggctcaggggaaattgatagtatccacccctcaggtgattgaaaacgatctccta
acaaaaagaatcagccttgaagatgtaacccacatcacctttgatgaagcccatagggca
gtaggaaattatgcttacacttttattgcggaaaaatacttcgagagcgcaagaaaccct
catgtgctcggaattactgcaagtcctggcagttcggacgagaaaatctctgaagtatgt
caggctttacacattgagaatgtctcggtgaagactgagaaagataaagatgtccgccct
tatgttcaggaaaaagaaatagaatggcttcaggtccagcttccccccgaaatggccgaa
atccggagttatctggaaaaaatctttgatgataggctcataacaataagaggcctgggg
ttttcaccaggtagtgggaaatacgtctccaaaaaagatctgttgcttttccagaagaaa
ttacagggtgaaattcgggtaggaggagatcctgctgtttttactgcgatgtcggtgctt
gctgaaatggtgaaggtgaaccatgctgtggaaatgattgagactcagggacttgagcct
ttcaggaaatacctggagaaacttgatgctgaagcctcttcaagcagtgcaagcaaggct
tcaaaaagactgatggatgatctctatatgagaaaagctctttatagagcaaaggaatgc
gaggtcgaacatcctaaactagagcttgcccggaaactcgtatccgaacagctaaaagaa
agccctgattccagggtaattgtttttacgaattacagggacacagcagagatagtggta
aatgccctatcagaagttccaggaattgctcctatccgttttgtagggcaggcctcgcgc
cttaaggacaaagggcttacgcaaaaacaacaggtggaagttctcgataagtttagagca
ggagaatacaacgtacttgtagctacctcagttgctgaagaaggtcttgatatcccttcc
acagacctggtattattctacgagcccattccctcggaaattcggagcatccagcgtaaa
ggcaggacaggcaggcagcataaaggtagggtcattatacttgtgacaaagggtacacgc
gacgaagcctattactggagcagtaagagcaaggaaaaaaagatgctaaacagcatgcac
gggcttgaagctcttctggtccccaaaaactcaaagcaaggttcgaaactatcagacttt
gagtccgaagcttttattccggactatgcacaaaatgacgctgaaagtgagactaaaaca
gggaatagattggaaaatgcagatgtaatgcagggaaataaaggcccaatacagggaaat
aaagacccaatgcgaggaaataaaggtccaatgcggggaaataaaggcccaatgcaggaa
agcagtgatctggctgtaaatctcagtggttttgtaaatagcaggggcaaagctgtagat
ggcaacgtttttccagataacaaggatgcggctgtagatagcagtagttttgcaggcatc
ggaggcaggtcttcagatattagagatttaactgtagacagcggggagttaactgtagac
agcagagatatggctgcaggcccagactgcaacagggcgaatgaagaaattaacgaagat
aaccgtggggtcgggaaagaagaaaagagcggagaagaaaatagcagagaagaaaatagt
agagaaggaaagagcagagacgaaaaaagcagagaagaaaacgtaaaagaaagacaaaaa
acctttgtctattttgaaactctttctggaaagaaacctgaatccgcacccgaaactact
gcagaagcatccaaaatagaaatcaatcccgaatccctgaaaatggtagtggacttcagg
gaagcaaaaagtggggttgcaaatgttcttgataagcttggagtagaagttatttttacc
acgcttgaaattggtgattacgttgtaagcgaccgccttgccgtggagagaaagcgcacg
gatgactttgtaaactctcttgttgatggaaaacgtaatctttttgtgcagttatcaaac
cttacaagagtatatcaaaagcctgttcttattattgaaggaacagaacttttcacttca
aggcaaatcaaccctaatgctatttatggctccttgatatccattgctattgattttgga
gtgtcgctgctatattcaagagatgaagaagaaactgctgcaattttaaaaatgcttgca
aagcgtgagcagatggaaaataagagagaggtcaaccctcacggaaaaaagtcagcaagt
acccttattgagcagcaggaatacctggtatccgctatcgcagacatcgggccgaaagct
gcaagaaaccttcttttgcacttcggctcagtagaggctattatgaaagctgatgctaaa
gaactaaagaatgtaaaattaatagggccaaaaagagcaacaaaaattagagaactcatt
gaggctccctataaaggataa
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