Candidatus Minimicrobia vallesae: KOY49_03085
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Entry
KOY49_03085 CDS
T07770
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mvl
Candidatus Minimicrobia vallesae
Pathway
mvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KOY49_03085 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvl03400
]
KOY49_03085 (uvrB)
DNA repair and recombination proteins [BR:
mvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KOY49_03085 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KOY49_03085 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
P-loop_SecA
SWI2_SNF2
nSTAND3
DUF87
AAA_22
Microtub_bd
UB2H
DUF3071
Motif
Other DBs
NCBI-ProteinID:
QWQ31159
UniProt:
A0A8F1SA54
LinkDB
All DBs
Position
complement(453235..455205)
Genome browser
AA seq
656 aa
AA seq
DB search
MNKFRLSSSYQPTGDQPRAIAQLVDGLEKGQREQTLLGVTGSGKTFTMANIIAKRNVPTL
VLAHNKTLAAQLFSEFKEFFPDNEVHYFVSYFDYYQPEAYIASSDTYIEKDSKINDEIDR
LRHAATSALLTRRDVIIVASVSCIYGIGSPETYADMAIKLTVGERRVQDKFIRLLTDIQY
KRNDIDFARGTFRVRGDVVDIFPAGQDTAVRVEFFGDEIERLTKIDPLTGEILDRPDQLT
IFPSSHYSTPRERIEKAIVGIENEFNQRLKWFEDNGKFLEAQRLSQRTKYDLEMLKETGF
VKGIENYSRYLTDREPGEQPATLIDYFPDDWLLLVDESHMTLPQVRGMYNGDRARKEVLV
EHGFRLPSALDNRPLRFDEFNQHIHQAIYVSATPGDYELSHSPKPAEQLIRPTGLLDPPI
EVRPTDGQVDDLMEEIRQTIAKGHRVLVTTLTKRMAEDLSAYLTENGVRTAYLHSEIDTL
ERGDILKDLRLGTYDVLVGINLLREGLDLPEVSLVAIMDADKEGFLRSEQALIQTIGRAA
RHVDGRVIMYGDNVTDSMRRAIDETNRRRAIQQKYNEEHNITPQTIQKKIDDGLRSIIPQ
KESDKKPKLNLKKIPKDEYPALIKDLTAQMELHSANLEFEKAAELRDLIAEIRHTM
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatttcgcctctcttcttcatatcagcccacgggcgaccagccgcgagcaatt
gctcagttggtcgatggtttggaaaaaggtcagcgcgagcaaactttgctgggcgtgact
ggttcagggaagacgtttacgatggcgaatattatcgctaagcgcaatgtgccgacgctg
gttttggctcacaataagactttggcggcgcaacttttttctgagtttaaggaatttttt
ccggacaatgaagtccattattttgttagctattttgattactaccagccagaggcgtac
atcgcttcaagcgacacttatattgagaaagattcgaaaattaacgacgaaattgatcgg
cttaggcacgctgcaacttctgcgctgcttacgcgccgcgatgtaattatcgtggcgagt
gtgagctgtatttacggcattggttcgccagaaacttacgccgatatggctattaaattg
accgttggtgagcgccgagttcaggacaagtttatccgcctactaaccgacattcagtat
aaacgcaatgacattgattttgcgcgcggaacttttcgggtgcgcggcgatgttgtggat
atttttccggcaggtcaagatactgcggttcgcgtggaattctttggcgatgaaattgag
cggctgacgaagatcgaccctttgactggcgagattttggatcgtccagaccaattgaca
attttcccgtccagccactattcgacgccgcgtgagcgaattgaaaaagcgattgttgga
attgagaatgagtttaatcaacggctgaaatggtttgaggataatggcaagtttttagag
gcgcaaaggctaagtcagcgtaccaaatatgatttggagatgttgaaggaaactggtttt
gtgaagggaattgagaattattcgcgctatttgaccgaccgagaacctggcgagcagcct
gcgactttgattgattattttccggacgattggctgcttttggttgacgaatcgcacatg
acattgccgcaagttcggggaatgtacaacggtgatcgtgcccgtaaggaagttttggtt
gagcatggttttcgccttccgagcgcattggacaatcgcccgcttcgatttgacgagttc
aatcagcatattcatcaggcaatttatgtttccgctacgccgggagattatgaactttct
cattcgccaaagccagctgagcagcttattcgaccgactgggctgcttgatccgccgatt
gaagttcgaccgaccgacgggcaggtcgatgatttgatggaggaaattcgccagacgatt
gcgaaaggtcatcgcgtgttggtgacgacactaaccaagcgaatggcggaggacttgagc
gcttatttgacggaaaacggcgtgaggacggcgtatttgcatagcgaaattgatacgctg
gagcgtggcgatattctgaaagatttgcgacttggaacgtatgatgtgctggttggaatt
aatctattgcgtgaaggtctggaccttccggaggtcagtttggtggcaattatggacgcc
gacaaagaaggtttcttgcgtagtgagcaggcgctgattcagacgattggacgggcggcg
cggcacgttgatgggcgagttattatgtatggtgacaatgttacggacagtatgcgtcga
gcaattgatgaaacgaatcgacgtcgagcgatccagcagaaatataacgaagagcataat
attacgccgcaaactattcagaagaaaattgacgatggtttgcgctcgattattccgcaa
aaagaatctgataaaaagccaaagctcaacctgaagaaaattccaaaagacgaatatccg
gctttgattaaagatctgacggcgcaaatggaactgcatagcgctaatttggaatttgaa
aaagcggcagaactgcgtgatttaattgcagaaattcgtcatacgatgtag
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