Moellerella wisconsensis: MNY66_09325
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Entry
MNY66_09325 CDS
T07971
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mwi
Moellerella wisconsensis
Pathway
mwi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MNY66_09325 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mwi03400
]
MNY66_09325 (mfd)
Enzymes [BR:
mwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MNY66_09325 (mfd)
DNA repair and recombination proteins [BR:
mwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MNY66_09325 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFD_D3
DEAD
UvrB_inter
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
ERCC3_RAD25_C
BioW
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
UNH43974
LinkDB
All DBs
Position
2105626..2109072
Genome browser
AA seq
1148 aa
AA seq
DB search
MSAKYRYELPQRSGDVRQLGCLIGAAGAIECGEIIERHQGPVVLVTSDMQNTLRLRDEIR
QFTGLPINTLSDWETLPYDSFSPHQEIISNRLATLYRLPTLQKGVLILPINTLMQKVCPA
DYLAGHALLMSKGDKLSRDKLRTELEQAGYRHVEQVLEHGEYATRGALLDLFPMGSEVPY
RIDFFDDEIDSLRTFDVDTQRTLTEVEQINLLPAHEFPTDQEAIELFRSQWRERFDVRRD
AEHIYQQVSKKTLPAGIEYWQPLFFSQPLPSLFDYFPENTLFISQDFQAAAERFQADTLQ
RFDSRKVDPMRPLLAPSELWLTLEQVNQQIKKWPRVQLSQDKLTTKAAHTNLQYQLLSDI
SVNGQSKSPLDKLRQFIETFKGAIVFSVESEGRRESVVELLARIKIRPESIDSLNQRQNS
RFTIMIGPAEHGFIDNQHNFALICESDLLGERVTRRRSETKRSINTDTLIRNLAELRPGQ
PVVHIEHGVGRYQGLTTLEAGGVKAEYLILTYAGNDKLYVPVSSLHLISRYSGGADENAP
LHKLGSDSWSRARQKAAERVRDVAAELLDVYAQRAAKPGFAFKQDREQYQIFCQGFPYQT
TPDQEQAINAVMSDMCQPIAMDRLVCGDVGFGKTEVAMRAAFLAVNNHKQVAVLVPTTLL
AQQHYDNFRDRFANWPIQIEMISRFRTAKEQQQVIQDTIDGKVDILIGTHKLLQNDIIWK
DLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPA
RRLAVKTFVRQYDELVIREAILREVMRGGQVYYLYNDVENIEKAKNRLEELIPEARFVVG
HGQMRERELERVMTDFHHQRFNVLICTTIIETGIDIPSANTIIIERADHFGLAQLHQLRG
RVGRSHHQAYAYLLTPHPKAMTTDAQKRLEAISSLEDLGAGFALATHDLEIRGAGELLGD
DQSGQMTTIGFTLYMELLESAVEALKDGREPSLEDLTQQQTEIELRMPVLLPEDYIHDVN
IRLSFYKRIASAQDQPELNELRIELIDRFGLLPDAGKYLLASAALRLQANILGIKRIEAH
EKGGFIEFSQRNKVDPSFLIGLLQSAPQTYRLDGPSKLKFILDLSDRMARIEFLKNLLTE
FSEHQLNG
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaataccgttatgaactcccacagcgcagcggagatgtacgccaactaggg
tgcctgataggtgcggctggtgctatcgaatgtggagagataatcgaacgtcatcaggga
cctgtcgttctcgttaccagtgacatgcaaaataccctccgtttgcgtgatgaaatacga
caattcaccggtttacccatcaacacgctatctgattgggaaacgctaccttatgacagt
ttttcaccgcatcaagaaattatttctaatcgacttgccactttataccggctacccacg
ttgcaaaaaggtgtacttattcttccgattaacaccttaatgcaaaaagtgtgtccagcc
gactatctagcagggcatgctttattaatgtcgaaaggcgataaactttcgcgtgacaaa
ttgcgtactgagcttgaacaagccggctatcgtcatgtcgagcaagtgcttgaacatggg
gaatatgctacacgcggtgcacttctcgatttatttccaatgggcagtgaagttccttat
cgtattgatttttttgatgatgagattgatagtctacgaacgtttgatgttgatacccag
cgcacgctaacggaagttgagcagattaatttactgcccgcacatgagttcccgaccgat
caggaagctatcgaattattccgcagccaatggcgtgagcgcttcgatgttcgtcgtgat
gctgagcatatttatcagcaagtgagtaaaaaaacactgcccgcagggattgaatattgg
caacccttattttttagtcaaccgttgccttcgttgtttgactacttccctgaaaataca
ttatttatttcgcaggattttcaagccgctgccgaacgatttcaagctgataccctgcaa
cgcttcgacagtcgaaaagtcgatccgatgcgccctttgttagcaccgagcgaattatgg
ctaaccttagagcaggtcaatcaacagattaaaaagtggccacgggtgcaattatcccaa
gataaattaaccactaaagccgcacatactaatttacaatatcaattattgagcgatatc
agcgtcaatggacaaagtaaatcgccattagataagttgcgccaatttatcgaaaccttt
aaaggagcgattgttttctcggtagaaagtgaaggccgacgtgaatctgtagttgagtta
ctggctcggataaaaattcgccctgagtcgattgattcgcttaatcaacggcaaaattca
cgttttactatcatgatcggacctgctgagcacggttttattgataatcagcataacttc
gctcttatctgcgaaagtgatttattgggcgaacgcgttactcgtcgtcgttctgagacc
aaacgcagtatcaataccgatacgctaattcgtaacttagccgaattacgtcccggccag
ccggtggtacatatcgaacacggtgtgggtcgttatcaaggattaaccacgctagaagcc
ggtggcgtaaaagccgaatatctgattttaacctacgccggtaacgataaactgtatgtc
cccgtttcgtcgctgcatttgatcagtcggtattcgggaggagccgatgaaaatgcacca
ctgcacaaactgggcagtgatagctggagccgagctcgccaaaaagccgcagaacgagtt
cgtgatgttgccgctgagctattggatgtctatgctcaacgtgctgcgaagcccggcttt
gcgtttaaacaagaccgtgaacaatatcaaattttctgccaaggattcccttatcaaacc
actccggatcaggaacaagctatcaatgcagtaatgagcgatatgtgccaacctattgct
atggatagattagtttgtggtgatgtcggttttggtaaaaccgaagtcgcgatgcgcgct
gcctttctggcggtcaataatcacaaacaagtagcagtattggtgccaacaacattatta
gcccaacaacattatgataatttccgtgatcgtttcgctaattggccaatccaaatagaa
atgatctcacgcttcagaacggccaaagaacaacaacaagttattcaagacactatcgac
ggtaaagtggatatacttatcggtacacataagttattgcaaaatgatattatatggaaa
gatttagggctgctaattgtcgatgaagaacaccgttttggggtccgtcataaagaacgg
atcaaagctatgcgcgccgatgtggatattctgacgcttaccgcaacaccgatccctcgt
accctaaacatggccatgagcggtatgcgtgatttatcaattatcgctaccccgcccgca
agacgcttagcggtaaaaacctttgtacggcaatatgatgagctggtgatccgtgaggct
attctgcgtgaagtgatgcgtggcggccaagtttattatctgtataacgatgtcgaaaat
atcgaaaaagccaaaaatcggctggaagaactgatccccgaggcgcgttttgtcgttggt
catggtcaaatgcgcgagcgtgagttagaacgggttatgaccgatttccatcatcagcgt
ttcaatgtcttaatttgtacgacaattatcgagacgggtatcgatataccgagtgctaat
accatcattattgagcgtgccgatcattttggtttggcacaattgcatcaattgcgcggt
cgcgttgggcgttctcatcaccaagcctacgcctatttattaactccgcatccaaaagcg
atgaccaccgacgcacaaaaacgcttggaggctatttcatctttagaagatctcggggct
ggatttgcattggcgactcatgatttagaaatccgtggcgccggtgagctgctcggggat
gaccagagcggacaaatgaccaccatcggttttacgctgtatatggagttgttagaaagt
gcggttgaagctctaaaagatgggcgagagccttcactggaagatttaacccagcagcaa
acagagattgagctgcgtatgccggtacttctacctgaggattatatccatgatgtcaat
atcaggctctccttctataaacgaatagccagtgcgcaagatcaacccgaacttaatgag
ctacgtattgaactgattgaccgttttggtttattgcccgatgccggtaagtatttattg
gcctctgcggcattacgcctccaagctaatattttagggatcaaacggattgaagctcat
gaaaaaggtggctttattgaattcagtcaacgcaataaagttgatccaagtttcttaatc
ggtttattacaaagcgctccgcaaacctaccgtttagatgggccaagtaaactgaaattt
attctcgatttaagcgatagaatggccaggattgaatttttgaaaaacttattgaccgag
tttagcgaacatcaattaaatggttaa
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