KEGG   Myotis brandtii (Brandt's bat): 102239888
Entry
102239888         CDS       T02920                                 
Symbol
THOC1
Name
(RefSeq) THO complex 1
  KO
K12878  THO complex subunit 1
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03013  Nucleocytoplasmic transport
myb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102239888 (THOC1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102239888 (THOC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myb03019]
    102239888 (THOC1)
   03041 Spliceosome [BR:myb03041]
    102239888 (THOC1)
Messenger RNA biogenesis [BR:myb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102239888 (THOC1)
Spliceosome [BR:myb03041]
 Complex C
  Other components
   EJC/TREX
    102239888 (THOC1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102239888 (THOC1)
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 102239888
NCBI-ProteinID: XP_014391430
LinkDB
Position
Un
AA seq 578 aa
MKPDFLGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRM
CNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLG
QKHAEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKT
FLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRR
HILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVE
HILNTEENWNSWKNEGCPSFVKERTSDTKPTRAVRKRTAPEDFLGKGPNKKILMGNEELT
RLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPESMVENEYKAVNNSNYGWRALRL
LARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENE
SPDARRDKPVTGEQIEIFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRARQLLVA
WQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgaagccagacttcctgggtatttgcaccgcgtctacaccttttgtattgttgggagat
gttttggattgtctccctttggatcaatgtgacacaatattcacttttgtggaaaaaaat
gttgctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatg
tgcaatgatctcttaagaagattatcaaaatcccagaacacagttttctgtggacgaatt
caactttttttggccaggcttttccctttatctgagaaatctggtcttaatttgcagagt
cagtttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggt
cagaagcacgctgaagatagagaagaaggaatggacgtagaagaaggtgaaatgggtgat
gatgaagctccaacaacttgctccattccaattgattacaacctgtaccgcaaattctgg
tcccttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaact
tttctcaagtactcagaagaagttctggctgttttcaagagttataaattagatgatact
caggcctcaagaaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgca
aaatttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgccga
cacatcctactgcagtatctcattttattccaatatctcaagggacaggtgaaattcaaa
agttcaaactatgttttaactgatgagcagtcactctggattgaagatactacaaaatca
gtttatcaactgctatctgaaaacccacccgatggagaaagattttcaaagatggtagag
catatattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagtttt
gtgaaagaaagaacatcagatactaagccaaccagagcagtacgaaagagaacagcacca
gaggacttcctggggaaagggcccaacaaaaagattctgatgggaaatgaggagttaaca
aggctttggaatctctgccctgataatatggaagcttgtaaatcagacacaagagaatat
atgccaactttggaggaattctttgaagaagccattgaacaggcagacccggaaagcatg
gttgaaaatgaatataaggctgtgaacaattcaaattatggttggagagccctgagactg
ttagcacggagaagccctcacttcttccagccaaccaaccagcagttcaaaagtttgcca
gaatatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaa
ataaaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaa
agccctgatgctcgccgagacaaacctgtaacaggggaacaaatagagatatttgccaac
aaattgggtgaacaatggaagattctggctccctacttggaaatgaaagactcggaaatt
agacagattgagtgtgatagtgaagacatgaagatgagagctaggcagttactagttgcc
tggcaagatcaagagggagtccatgcaacgcctgagaatctgattaatgcactgaataag
tctggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag

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