Myotis davidii (David's myotis): 102752844
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Entry
102752844 CDS
T02992
Symbol
PCF11
Name
(RefSeq) PCF11 cleavage and polyadenylation factor subunit
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
myd
Myotis davidii (David's myotis)
Pathway
myd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102752844 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myd03021
]
102752844 (PCF11)
03019 Messenger RNA biogenesis [BR:
myd03019
]
102752844 (PCF11)
Transcription machinery [BR:
myd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102752844 (PCF11)
Messenger RNA biogenesis [BR:
myd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102752844 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_charged
PCF11_RFEG_rpt
Pcf11_helical
CID
CFIA_Pcf11
SHOCT
Motif
Other DBs
NCBI-GeneID:
102752844
NCBI-ProteinID:
XP_006763804
LinkDB
All DBs
Position
Un
AA seq
1583 aa
AA seq
DB search
MSEPTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
TSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QLETSNLGPGSAPSKLHVSQIPPMAVKTPHQIPLQPEKSRPGPSLQIQDLKGTNRDPRLN
RMSQHSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQL
DSKSKSKSKSPSPLKNKFSHTKDLKNQESECSRVSDMSKRDPRLKKHLQDKTDSKDDDIK
EKRKTSEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDAITEDSEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKIRQSGCKQSHMEDFMPPSRE
ERNAKRSTKQDVRDPRRIKKTEEERPQETTSQHSTKSGTEPKENVENWSSSKSNKRWKSG
WEENKSLQQGDDHSKSPHLRHRESWSSTKGILSPRAPKQQHQLSVDANLQIPKELTLASK
RELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPSEENKGGLKKKPL
LSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASRN
SGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFNDR
FPLKRRRYEDADKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMIF
EGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT
PLRFEGPIGQAGRGGFRFEGSPGLRFEGPHGQSVTGLRFEGQHNQLGGNLRFEGPHGQPG
VGIRFEGPLVQQGGGMRFEGPVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPR
FDGLHGQPGPRFERTGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQ
GARFDNHPSQRLESVSFSQTGPYNEPPGNAFNTPSQGLQFQRHEQIFDSPQGPNFNGPHG
PGNQSFSNPLSRASGHYFDEKNLQSSQFGNFGNLPAPITGNIQASQQVLTGVAQPVPFGQ
GQQFLPVHPQNPGAFVQNPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATT
QVNEVAAQPPTEEEEDQNEDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTT
SQTDVYADHLDWHYRQNRTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKV
HEEVVLKTQEAAKEKEFQSVPAGPAGAVESCEICQEQFEQIWDEEEEEWHLKNAIRVDGK
IYHPSCYEDYQNTSSFDCTPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPP
ACTEESIATPTEIKTENDTVESV
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccgacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatccctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaacacctggcacagtggtc
acttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcagttacttgcaaaacaaaaacagttattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagctggagacatccaacttaggtcctggatctgcaccgtccaaattacatgtttcacaa
attccccctatggcagttaaaactccccatcagattcctttgcaacctgaaaaaagccgt
ccaggtccatccttacaaattcaggacttgaaaggaacaaaccgggatccccgtcttaat
aggatgagtcagcattctcatggaaaagatcaaagtcacagaaaagaattcctaatgaat
acattaaaccaatctgatattaagacaagtaaaactataccttctgaaaaactaaattca
tccaaacaagaaaaaagtaaatcgggtgaaaaaataaccaagaaagaacttgaccagtta
gattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctctcac
acaaaagacttgaaaaatcaagaatctgaatgctcaagggtgtctgacatgagtaagaga
gatccaagattaaaaaaacatcttcaagataagactgatagcaaagatgatgatataaaa
gaaaagagaaaaacttcagaaaaaaaagataaagatgagcatatgaaatcatctgaacat
agactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaagatgcaata
acagaagactcagaaaaacagggaacaaaaccagggagatcaagtactagaaagcgatca
agatcgagatcacccaagtctcggtcaccaattatacattctcctaagagaagagatagg
cggtcacccaaacgaaggcaaaggagtatgtctccaacctcaacagccaaagctggaaag
attcgccaatctggatgtaagcagtcacatatggaggactttatgccaccttccagggaa
gaaagaaatgctaagagaagtactaaacaggatgttcgagatccaaggcgaataaaaaag
actgaagaggaacgaccgcaagaaactacaagtcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaattggtcaagttccaagtctaacaaaagatggaaatctggt
tgggaagaaaataaaagcttacaacaaggtgacgaccatagtaaatctcctcatctaagg
catagggaaagctggtcaagcactaaaggaattttgtcacctcgagccccaaagcaacag
catcaattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagcaaa
agagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggatgag
ttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacataga
tgcaatgtacgagatagtccttcagaagaaaataaaggtggattaaaaaagaaacctctc
ttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacaggtt
cagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttgacc
gatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtaggaat
agtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttctcct
atatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaagacat
gacgagcaagtctctgctaaaggtgtgcgagaagagcagaggtcaccattcaatgatcgt
tttccacttaagcgacgtagatatgaagatgcagataaaccatttgtagatagcccagca
tcacgattcgccggcctcgatacaaatcagcgacttacagcgttagctgaagacagacca
ttatttgatggacctagtaggccatcagtaacaagagatggcccaaccaagatgattttt
gaaggacctaataaattaagccctagaattgatggacctcctgcaccaggttctcttcga
tttgatgggtcacctggacaaatggggggaggtggtcctttgagatttgaaggaccacaa
ggtcagctaggaggcgggtgtcctttgagatttgaaggtcctccaggaccagtagggaca
cctttgcggtttgaagggccaattggtcaagcaggcagaggtggttttcggtttgaaggt
tcccctggtctgaggtttgagggcccccatggtcagtcagtaactggtctgaggtttgaa
ggacaacataatcaacttggtggaaaccttaggtttgagggtccacatggtcaaccaggg
gttgggatcaggtttgagggacccttagtccaacaaggaggtggaatgaggtttgagggt
cctgtaccaggaggtggactgagaattgaagggcctctgggtcaaggtggtccaagattt
gaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttaccaaga
tttgatggattacatggtcaaccaggtcctagatttgaaagaactggtcaaccaggccca
cagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgttcctcaa
agatttgatggtccacaacaccagcaagcatcaaggtttgatattccccttggtcttcaa
ggcgcacgatttgacaatcatccttcacaaaggcttgaatccgtttctttcagtcagact
ggtccatataatgagccgcctggcaatgcttttaataccccatcccaaggactgcaattc
caaagacacgaacaaatatttgattcacctcaaggaccaaattttaatggaccacatggc
cctgggaaccagagtttctcaaatccccttagcagagcttctggacactattttgatgaa
aagaaccttcaaagttctcaatttggaaactttggcaatttacctgctccaataacagga
aacattcaggcatctcaacaagttctgactggtgttgctcaaccagtaccatttggccaa
ggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaatccttca
ggagcccttcctaaggcatatcctgataatcacctcagtcaggtggatgtaaatgaatta
ttttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattcagctacaaca
caagtaaatgaagttgctgctcagcctcccactgaagaggaggaagatcaaaatgaagat
caagatgttccagatcttaccaattttacgattgaagagttaaaacaacgttatgatagt
gttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggtttacaaca
tcacagacagatgtttatgcagatcacttggactggcattatcggcaaaatagaactgaa
aaagatgttagcagaaaagtcactcatagacgttggtactacagtttaacagactggata
gaatttgaggaaatagctgatttggaagaacgtgcaaagagccagttttttgaaaaggtg
catgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccaaagtgta
ccggcagggccagctggagcagtggagagttgtgaaatctgtcaagaacaatttgaacaa
atctgggatgaagaagaggaggagtggcatttaaagaatgccattagagtggatggaaag
atttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgtacacca
tctcccagcaagacaccagttgaaaaccctttgaacattatgttgaacattgtcaaaaat
gaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgataccccacca
gcttgtacagaggagagcatagcaacacccactgaaattaaaactgaaaatgatacagtt
gagtcagtttaa
DBGET
integrated database retrieval system
