Mizuhopecten yessoensis (Yesso scallop): 110451010
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Entry
110451010 CDS
T05079
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04142
Lysosome
myi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110451010
04142 Lysosome
110451010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110451010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myi04147
]
110451010
Membrane trafficking [BR:
myi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110451010
Exosome [BR:
myi04147
]
Exosomal proteins
Proteins found in most exosomes
110451010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
110451010
NCBI-ProteinID:
XP_021354511
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MATLLPIRFQEHLQLQNVGINASNIGFSTLTMESDKYICIREKVSDTAQVVIIDMNDSSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKSHTMTDDVIFWKWISVNTVA
LVTETCVYHWSMEGDSQPQKIFDRHTNLAGCQIINYRTDAKQQWLLVIGISAQTGAEAAQ
NRVVGAMQLYSVERKVSQPIEGHAAAFATFKLEGNSNPSTLFMFAVRGAQGGKLHVIEVG
QPPQGNQPFTKKAVDVFFPPEAQNDFPVAMQVSPKHSVTFLITKYGYIHMYDIETGTCIY
MNRISGDTIFVTAPHEASSGIIGVNRKGQVLSVSVEEDNIVQYLTTTLQNPDLALKVASR
GNLPGAEDLFVRKFNNLFQSGNYAEAAKVAAGAPKGILRTPQTIQRFQQVPATTGQTSPL
LQYFGILLDKGQLNKYESLELCRPVLQQGRKQLLEKWLKEEKLECSEELGDLVKATDPTL
ALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGFTPDFIFLLRNIMRMNPEQGLQFAQ
MLVQDDEPLADLNQIVDVFMEFNLIQQCTSFLLDALKNNRPAEAPLQTRLLEMNLMSAPQ
VADAILGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNY
FGSLSIEDSLECLKAMLQANIRQNLQVCVQIATKYHEQLGTQSLIEIFESFKSFEGLFYF
LGSIVNFSQDTDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPL
IIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPARLPVVIGGLLDVDCGEDVIKQLIL
VVKGQFSTDELVEEVEKRNRMKLLLPWLEMRVHEGVQEPATHNALAKINIDSNNNPERFL
RENQFYDSLVVGKYCEKRDPHLACVAYERGQNDMELIKVCNENSLFKSEARYLVRRRDTD
LWAVVLQEDNEYRRQLIDQVVQTALSETQDPEDISVTVKAFMTSDLPNELIELLEKIVLE
NSVFSDHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKK
FEVNTSAIQVLIDHVNNLDRAYEFAERCNDPAVWSQLGRAQLNQGLVKEAIDSFIKADDP
SEYMEVVNVASNNNSWEDLVKFLQMARKKARETFIETELIYAYAKTNRLADLEEFISGPN
HANITQVADRCFDDQMYEAAKLLYNNVSNYARLAITLVHLGEYQGAVDGARKANSTKTWK
EVCFACVNNEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELISLLEAALGLERAHM
GMFTELAILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWPELVFLYDKYEEYDNA
VITMMSHPTAAWRESQFKDIITKVANIELYYKAVQFYLDFKPLLLNDLLLVLTPRLDHTR
AVNFFTKVNEIPLVKPYLRAVQKNNNKATNEALNNLLIEEEDYQGLRTSIDAYDNFDNIT
LAQRLEKHELIEFRRIAAYLYKGNNRWKQSVDLCKKDKLFKDAMCYAGESRNIDIAEDLI
AWFLENQYHECFAACLFQCYDLLRPDVILELAWRHNIMDFAMPYMIQVVREYISKVDKLE
QSEAVRSEEEQKAEDRPIVFAENQLMLTAGPATMIPPPQAPSPQPGYGAQYPGMVPGMAP
GMAPGSVPYGYSM
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctgctcccaatacggtttcaggagcatttgcagctccagaatgttggaatc
aatgcatccaatattgggttcagtaccctcaccatggagtcagacaagtacatttgtatc
agagagaaagttagtgacactgcccaggttgtcatcatcgatatgaatgactcaagcaat
cccattcgccgtcccatttcggccgactctgctataatgaaccctgcaagcaaagtcatc
gctctcaaagctggaaaaactctgcaaatcttcaatattgagatgaaaagcaaaatgaag
tcacataccatgacagatgatgtcatcttttggaaatggatttccgtaaacaccgttgcc
ctggtaacagaaacctgtgtttaccattggagtatggaaggcgactcgcagcctcagaag
atcttcgacagacataccaatcttgctggatgtcagattatcaactacaggacagatgcc
aagcagcagtggttacttgtcattggcatttcagcacagacgggggctgaagcagcacaa
aaccgtgttgtgggtgcaatgcagctgtattctgttgaaagaaaagtcagccagcctata
gagggacatgcagcagcctttgccaccttcaaactagaaggcaactccaacccttccaca
ctattcatgttcgctgtcagaggggcacaaggtggaaagcttcatgtgattgaggtaggc
cagccacctcagggaaaccagccttttacgaagaaggcagtggatgttttcttcccaccc
gaagcacagaatgatttccccgttgccatgcaggtgagtcccaaacacagcgtaactttc
ctcatcacaaagtatggctacatccatatgtatgacattgagactggtacctgtatctac
atgaaccgcatcagtggcgacaccatctttgtcactgcccctcacgaagcttcgtcagga
atcatcggggtcaacagaaaaggacaggtattgtcggtgagtgtggaagaagataacatt
gtccaatacttgacaaccacactgcagaaccctgaccttgctctcaaggtcgcatcccgg
ggcaacctacctggtgcagaagatctctttgtccgtaaattcaacaacctcttccagagt
ggcaactatgcagaggctgccaaggtagccgcaggcgccccaaagggtatactacggaca
ccccagaccatacagcgattccagcaggtgccggcaaccacaggtcaaacttctccactc
ctccagtattttggaatcctgctagacaaaggtcagctcaacaagtatgaatctcttgag
ctgtgccgcccagtgttacagcagggtcgtaaacagctgctggaaaagtggctgaaggaa
gagaagttggaatgtagtgaagagctcggcgatctagtcaaggctacagacccaacgctg
gctctgtctgtgtacctcagagcaaacgtaccaaacaaagtaatccagtgttttgcagag
acgggacaattccagaaaattgtgttgtatgctaaaaaagtgggtttcacccctgatttt
atattcctcctgcgtaacatcatgaggatgaacccagagcaaggcctacagttcgcccag
atgttagtacaagatgatgagccactagcagatcttaaccagattgtggatgtcttcatg
gaattcaacctgattcagcagtgtacttcctttctgttggatgctctgaagaacaaccgg
cctgcagaggcacccctacagaccagacttttagaaatgaatcttatgtctgctccacag
gtggcagatgccatcctcggcaatcagatgtttactcactacgaccgtgcccatgtggcc
cagctgtgtgagaaggcaggacttctacaaagggccctggaacactacacagacctttat
gacatcaagcgggcagtcgtacacacccatctcctcaacccagagtggctggtgaactac
tttggctcattgtctatagaggactcgttagaatgtctgaaggccatgctgcaggcaaac
atccgccagaacctgcaagtgtgtgtacagatagccaccaaataccatgagcagctaggc
acacagtcactcatagagatcttcgagtcctttaaaagttttgaaggtctcttctatttc
ctgggatccatcgttaacttcagtcaggacacagacgtccattttaagtacatccaggct
gcctgtaagactgggcagatcaaagaggtggagcgaatctgtcgcgagagtaactgttat
gatccagagagggtgaaaaatttcctcaaggaggccaagcttacggaccagctgccgttg
atcattgtgtgtgatcgctttgactttgttcatgacttggttctctacctgtaccgcaat
agcttacaaaagtacatagagatctatgtacagaaggtaaaccctgcccggctcccggtt
gtaattggtggactccttgatgttgactgtggggaagacgtcatcaaacagctgatcctt
gttgtgaaaggacagttctctactgacgagctggtggaggaggtagagaagcgtaacagg
atgaagctgctgctgccgtggttggagatgcgtgtccatgagggagttcaggaaccagcc
acgcacaatgctctagctaaaattaacatagacagcaacaacaacccggagaggttcctc
agagagaaccaattctacgacagtttagtagtgggtaaatattgtgagaagcgtgacccc
cacttggcgtgtgtagcttatgaaagaggacagaacgacatggaactcatcaaggtgtgc
aatgagaactcgctgttcaagagtgaggcgagatacctggtacgtcgccgtgacactgac
ctatgggcagtggtgctacaggaggataatgaatacagacgccagctgattgaccaggtg
gtccagacagcgctgtccgagacacaggacccggaggatatttctgtcacagtcaaggct
tttatgacctcagatcttccaaatgaactgattgaactgttggaaaagattgttctggag
aactctgtcttcagtgaccacagaaatctacagaacctgttgattctgacagcaataaaa
gccgaccgtaccagagtgatggagtatattaaccgcctcgacaactacgatgcccctgac
attgctaacattgctatcagtaatgagctttttgaggaagcttttgcaatcttcaagaaa
tttgaggtcaacacatcagcaatacaggttctgatagaccatgtgaacaaccttgatcgg
gcctacgagtttgctgagcggtgtaatgacccagcagtgtggagccagctaggcagagct
caattgaatcaaggtttggtgaaagaggccattgactccttcatcaaggctgatgacccg
tctgagtacatggaggtagtaaacgtggccagtaacaacaatagttgggaagacctggtg
aaatttttacaaatggccagaaagaaggcacgggaaacattcatagaaacggaacttatt
tatgcctatgcaaaaaccaacagacttgcagatttagaggagtttatttcggggccaaac
catgctaatattacacaggtggctgaccgttgctttgacgaccagatgtacgaggcagcc
aaattgctgtataacaatgtgtctaactatgcgcgtctagccatcaccctggtacaccta
ggagagtaccagggagctgtggatggggcacgcaaggccaacagtacaaagacatggaaa
gaggtgtgttttgcctgtgtgaacaatgaagagttccggttagcccagatgtgcggactc
cacatagtagtacatgctgatgagctagaggatttaataaattattaccaggaccgtggc
tacttcgaggaactcatatcgctacttgaggcagcattaggtttagaaagagcccatatg
ggtatgtttacagaattagctatcttatactctaaatacaagccggagaagatgagggag
cacttagaactattctggtccagagtcaacattccaaaggttttacgagcagcagagcag
gcacatctgtggccagagctcgtattcttgtatgataaatatgaggagtatgacaatgcc
gtgataacaatgatgagccacccaacggcagcttggcgcgagagtcagttcaaggacatt
ataaccaaggtggccaacattgagctgtactacaaagcagtacagttctacctcgacttc
aagccactattactcaatgaccttctgctggttttaactcctcgtctggaccacacccgt
gcagtcaactttttcaccaaggtcaacgaaatcccactggtgaagccataccttagggca
gtgcaaaagaacaacaacaaagcaacaaatgaggcgttgaacaacctgctgattgaggag
gaggattaccagggccttcgcacctccattgatgcatacgataacttcgacaacataacc
cttgctcagcgccttgagaaacatgagctgattgagtttaggcgtatcgctgcttacctc
tacaaaggcaataatcgctggaaacagtcggtggacctgtgtaaaaaagataagcttttc
aaggatgccatgtgctatgcgggtgagtcgcggaacattgacatagcagaggatttgatt
gcctggttcctggagaaccaataccatgaatgttttgccgcctgcctgtttcaatgttat
gacttgctgagaccagatgtgatcctagagctggcctggcgacacaacatcatggacttt
gccatgccttacatgatacaggttgtgagagaatacatttccaaggttgataagctagag
cagtccgaagcagtacgatcagaggaggaacagaaagctgaggaccgccccattgtattt
gcggagaaccaactgatgctgacagctgggcctgcaacaatgataccaccacctcaagca
ccctcgccccagcctggctatggagcacagtacccagggatggtgccgggcatggcccca
ggaatggcccctggcagtgtgccatatggctacagcatgtga
DBGET
integrated database retrieval system
