Mizuhopecten yessoensis (Yesso scallop): 110453607
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Entry
110453607 CDS
T05079
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110453607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110453607
Membrane trafficking [BR:
myi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110453607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110453607
NCBI-ProteinID:
XP_021358294
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MPSTPQLSPQEEQEKLLEEANIIVKNQSFQMKRCLDKGKLMDGLKHASTMLGELRTSMLS
PKSYYELYMSISDELRHLELYLVDEFQKGRKVADLYELVQYAGNIVPRLYLLITVGVVYI
KSNELSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTKNVLPDTEEDTSSGDYEAGTVL
DSIDFVLLNFSEMNKLWVRMQHQGHSRDRVKREQERRELRILVGTNLVRLSQLECIDMDK
YKKLVLPGILEQTVSCRDPIAQEYLMECIIQVFPDDFHLQTLTSFLRACAELHESVNVKN
IIIALIDRLAQFSQNEEGHGIPADIQLFDIFSQQVSQVIQNRPDMPPEDIVSLQVALINL
ALKCYPDKTEYVDKVLETTEEIFNRLNLDQSLTSVHPSLEHGSPVSKELMRLMKIPVDSY
NNVLTVLQLGHFGPLFEYFDFKSRKIMSCYIINNVLENDTFIPTQENVDSILNIVNVLVQ
DQNDQPEEPEDPEDFAEEQGIMGRFIYLLQAEDLNQQYLILNTARKHFGSGGDQRIKFTL
PPIVFAAYRLSMRYQDLQEEDENWERKCQKIFQFCHQTIGALIKADMAEIPLRLFLQGAM
AAGQIEFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTLEQMSCFGEENHEPL
RTQCALAASKLLKKPDQCRGVSTCSHLFWSGKTSTSDGPMQDGKRVADCLKKGVKIANQC
MDDSVQVQLYVELLNHYIYYYERGCDQITVQVLNQLITKIKELIPNLEANEETEQINKHF
QNTTEHLQLRKNNPEADGPSYEALTV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgacaccacaactatcgccccaagaggagcaagagaaattgctggaggaggca
aatatcatagtcaagaatcaatctttccagatgaaacgatgtttggacaaagggaagttg
atggacggtcttaagcatgcatcgaccatgcttggggagctgaggacatccatgttgtcc
cccaaaagttactatgagctctatatgtcaatatctgatgaattacgtcacctggaatta
tatttagtcgatgaattccaaaaaggacgcaaggttgcagatttatacgaactggttcaa
tatgcaggcaacattgtcccacgattgtacctactgataacagtcggtgtggtgtacata
aaatctaacgagctatcacggaaggacatcctcaaggatcttgtggaaatgtgtcgggga
gtccagcaccccttgcggggcctcttcctcaggaactaccttctgcaatgtaccaagaat
gtacttcctgatacagaagaggacacttcaagtggagactatgaggccggaactgtactt
gactctatagactttgtcctgttgaacttttccgaaatgaacaaattgtgggtgcgtatg
cagcatcagggccactcacgggatcgtgtgaagcgtgaacaggagcggcgggaattgagg
atcctggtcggcacaaatcttgtccgtctaagtcagctggagtgcattgatatggacaag
tataaaaagttggtactaccagggattttagaacagacagtcagctgtagagatcccatc
gctcaggagtacctgatggagtgtatcatacaggtgtttcccgacgacttccacctacag
acactaacttcattcctcagagcgtgtgctgaactccatgagagtgtcaatgtaaagaac
atcatcattgctctgattgacaggttggcccagttttcccagaatgaggagggacatggt
attcctgctgacatccaactttttgatatcttctcacagcaggtctcacaagtcatacag
aatcggccggacatgccacccgaggatatcgtttccctacaggtagcgctgattaacttg
gcactcaaatgttacccagataagacagaatatgtggacaaagtgctggagacaacagag
gaaatattcaatcgactcaaccttgaccaaagcttaacttctgttcaccccagtctggag
catggcagtccagtttccaaggagttgatgcggctgatgaagatcccggtggacagctac
aacaacgtgctcactgtgctccagcttggacacttcggaccgctgtttgaatactttgac
ttcaagagcagaaaaatcatgagttgctacatcatcaataatgtgctggaaaatgacaca
ttcataccaacacaagagaatgttgacagtatcctgaacattgtaaatgtgctagtgcaa
gaccagaatgaccagcccgaagaaccagaagatcctgaggatttcgcagaggaacaaggc
attatgggaagattcatatatctcttacaagcggaggacctcaaccaacaatatctgatc
ctgaacacggccagaaaacactttggcagtggcggtgaccagaggatcaagttcaccctt
ccacccattgtgtttgctgcttacagactgtctatgagatatcaggaccttcaggaagag
gatgagaactgggagaggaaatgtcagaagattttccagttctgccaccagacgataggg
gctctgatcaaggcagacatggcagaaatcccgctcagattgtttctccagggtgctatg
gccgctggacagattgagtttgaaaatcatgaaacagtggcatatgagtttatgtctcaa
gcattctcgctttacgaggatgaaatcagtgatagcaaagcacagctagcagccatcacc
ctcatcattggaacactggagcagatgtcctgctttggggaggagaaccacgagcccctg
aggacccagtgtgccctggccgcttccaaacttctcaagaaaccagaccagtgccgtggg
gtgtcaacctgttcacacctgttctggtcgggtaaaacctcgacctccgatggtccgatg
caggatggaaagagagttgcagattgtctgaagaaaggagtgaagatagctaaccagtgt
atggacgactcggtacaggtccagctttatgtggaactgctaaaccattatatatactat
tacgagagaggctgtgaccagatcactgtgcaggtgttgaaccaactaataacaaaaata
aaagaattaataccgaacctagaagccaacgaagaaacagaacaaataaacaaacatttt
caaaacacaacagaacatttacaactaaggaaaaataatccggaggctgatggtccttcc
tacgaggctctgacggtatga
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