Mizuhopecten yessoensis (Yesso scallop): 110467045
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Entry
110467045 CDS
T05079
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110467045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110467045
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110467045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_17
TPR_14
TPR_16
TPR_12
TPR_1
TPR_11
TPR_8
TPR_9
ANAPC3
TPR_7
HrpB1_HrpK
RPN7
Coatomer_WDAD
TPR_15
ANAPC8
Motif
Other DBs
NCBI-GeneID:
110467045
NCBI-ProteinID:
XP_021379584
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MEPKEVKTTLKNAREAIRNKEFKEALKHCKSVLAWDKNNYNALVFVGVAAEGLDQIEQSV
KAYKRAIEAAPSQPLAWQGLAGLYEKRPSKEHDTDLITVYQKLQKLYCSDKEKLREILVK
LAKLYIRLQDLEKGLQIYEEVMGGEEDSARKIHLQTDLVDLLMAEKNLTTQQEHMVMELV
TGLTQKETVVTFTNPEHTVARYLDLLIKYHKVTNLPDQCGRLHSLFPALSRPLEILILHY
METETEIKQLEDTVDKLKDLDPESPYLVAAQGFILICQKNYIQARPLLASAAEILKKVVI
VHYYLAKALFTLHINKQAQRACDACFSVMLKKDRVVISAGELDSRLSVLQSQIDYRKGTP
TSLDRAIQALSQRGELPSDLRILLGFVYLKAGRVEDAQKLVTGTKDTAALDGWAHFVSGD
YSGAILRLTLALEAAPSESENHLMLGKALWAVWKEDKSRESAEKSYMSFLKAAKLDPYNS
EAFLYLGHFSLDVQHDKVKATKCYQKGFDLDNDNDDAGAALCDLLSSAGQEEDAHNIIVS
VTSKASAGSAKWAWLRLGLYQVKHDSPFVAVTSFQSALRADPKDNHVWECLAEAYLHRGS
LTAALKAFTKASELEPNSLYCLYQIAAIKQTLCMYTEAIAEYKVILERSPNYVPALKGIG
ETYLLLARTHLSHSFYGRTRDNCESALLFLTRAANHRADMSCLWKLMGDACTLIHVLAPE
TFSLTVDNKLVTKAGETSPPGTTSIGLSQTLELGARCYGRALKALPECASLWHDLGVNFF
YQSQQSTQTDMVATLSTKAVNALKKALTLDHRNHLHWNALGRVFCLKGCYSPDKAQHCFI
KSIQTEPNNVVAWSNLATLYFKNGNIELAHDAFKNAQSLEPSYVACWIGQALIAETVGHE
DAMDLFRHTTGMANHVEGATGYASWVCTMMKDKNKHNTELFRYSIKQMAAIPAASDALAK
YIDLEKNNPTAYNMYGLLLEHQGLYKMAVGSLQSALELCDHNSPYTQEIRINYARILCKD
QQYQEAVVQYDLVTDLITLEDTSNKGLALYMAGRYSESVKVYTAALDLAETEEEQSHVSV
AIGMVHYGAGDLDTTKTVLFQSYQMTPPSRIGLLALCALGILQTDMTLTLAVLQELLAGT
GSSSQSDVAHLMATANAVLEGNPSAAKNFIQQCIHKHPDQVDLWRLLGSVLITHCHDTTA
VTGAATCAQKVHTLNPTLPGIMKLVTSAQLAGGHHSRTNRKGVLSSAQRAVHLNPDQMGN
WCNLTAAVHSHTVFHGDKTDKLTELILLYLNWISSTFTDTPNILTSWCKRQRVVSLVEAG
RVDEAQQLLSKLKSCKDPELVDFATTITTVLSGDIGAMSQQLLQSRTDTILLEALLETCE
LGGVNVNLNDILGEMEEDRGRRTEFVCRVLHVYYMYKQAKRTSVQDDNDYLEMKKAVTAV
QQLDSHCLPVMLLLGTASLTVNPRLTKHCVVKVSEGGRLQIDKGDEVSIARCLLIKLIYN
PNKESEPLQKLLAEAAEEGDVVALDFYNVLSTTN
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaagaagtaaaaacaacattgaaaaatgccagagaagctatccgaaataaa
gagtttaaggaggcacttaaacactgcaagtctgtactggcttgggacaaaaacaactac
aatgcattggtatttgtgggcgtggctgcagagggactcgaccagattgagcagtcagtc
aaagcctataaaagggccatagaagcagcccctagtcaacccctggcctggcagggattg
gctggtctctacgagaaacgtccatcaaaagaacacgacacagacttgatcactgtttac
cagaagctgcagaaattgtattgcagtgataaggagaagttacgagagattctggtgaag
cttgctaagctttacataagacttcaggacctagaaaaggggttacagatatatgaggaa
gtgatgggaggggaagaagattcagccagaaaaattcaccttcaaactgacttagttgac
ctccttatggcagagaaaaatctgacaactcagcaagaacacatggtgatggagctggtt
actggactgacacagaaggagactgtggtcaccttcaccaacccagaacacacagtcgcc
aggtacctggaccttctcatcaagtaccataaggtgaccaaccttcctgatcagtgtggt
cgccttcactctctgttcccagcgctttctcgtcctctggaaatcctcatcttacactac
atggagacagaaacagaaataaaacaactggaggacactgttgataagctgaaggacctt
gatccagaaagtccgtaccttgtcgcagcccagggcttcatattgatatgtcagaaaaac
tacattcaggctcgaccattgcttgcctcagctgctgagatcctgaagaaagtagtcata
gtgcattactacctagccaaggcgttgtttacactacacatcaacaaacaggcacaaagg
gcctgtgatgcctgttttagtgtgatgctgaagaaggaccgtgtggtgatatcagctggt
gaactggactcgcgtctgtccgtcctacagtcccaaatagactacaggaaaggtacaccc
acctccctggacagggccattcaagcactttctcagagaggagagcttcccagtgatctg
aggatattactgggatttgtttacctgaaggccggtagagttgaagatgcccagaaattg
gtgaccggtaccaaggacacagccgctctggacggatgggcacattttgtcagtggagat
tactctggggctatcctcaggttaactctagccctagaagctgctccaagtgaaagtgag
aaccacctgatgctgggtaaagcattgtgggcagtgtggaaggaggataagtctagagag
tcggcggagaaaagctacatgtcttttctaaaggcagccaagttggacccatataacagc
gaggctttcctgtatctcggtcacttttccttagatgtccagcatgacaaggtcaaggcc
accaagtgttatcagaaggggtttgaccttgacaatgacaatgatgatgctggtgctgcc
ctctgtgatctattgtcaagtgcaggtcaagaggaagatgcccataatatcatcgtgtct
gttacatctaaagctagtgctggaagtgccaagtgggcgtggctaagattggggctgtac
caagtcaaacatgacagtccatttgtggccgtcaccagcttccagtcagcactgagagct
gatcctaaagacaatcatgtgtgggagtgcctggctgaggcctacctacacagaggcagt
ctgacagctgcactcaaggcctttaccaaggcatcagagctggaaccaaactccttgtat
tgtttgtatcaaattgctgctataaagcagaccctgtgcatgtacacggaggccattgcg
gagtacaaggtcatcctggagcgctcgccaaactacgtacccgctttaaagggtattggg
gagacttacctattgctggctaggactcacctgtcacacagtttctatggtcgtactaga
gataactgtgagtctgccctgctgttcctcaccagagcggcaaaccaccgggcagacatg
tcctgtctgtggaagttaatgggtgatgcctgtaccctgatccatgtcctggcaccagag
accttcagcctcactgtggacaacaaactagtgaccaaggcaggggagacaagtcccccg
gggacaacaagtataggactgtcacagacactggagctgggggctaggtgttacggccga
gctttgaaggctcttccagagtgtgcttcattatggcatgaccttggggtcaactttttc
taccaatcacagcagtcgacacaaactgacatggttgccacactgtccacgaaagctgtg
aatgctctgaagaaagcattgacccttgatcatagaaaccatctacattggaatgctctt
ggaagggtgttttgtttaaaggggtgttacagtccagataaggcccagcactgcttcatc
aagtccatacagactgaacccaataatgttgtggcttggtctaatttggctacactgtat
ttcaagaatggtaacatagagcttgcccacgatgcctttaagaatgcccagagtttagaa
ccatcatacgttgcctgctggattgggcaggcactgattgcggagactgttggacatgaa
gatgctatggacttgtttagacacaccactgggatggccaatcacgtagagggagccacc
gggtatgccagttgggtgtgtaccatgatgaaggacaagaataaacacaacacagaattg
ttccgctactccataaaacaaatggccgccattccagcagcctctgatgctctcgctaag
tatatagatcttgagaagaacaaccccacagcttacaacatgtatggattgttgttggaa
catcaggggctatacaagatggccgtcggctctctccagtcggccttggagttgtgtgat
cacaactcaccctacacacaagaaattagaatcaactatgcccgcatactctgcaaagat
cagcagtaccaggaagctgttgtacagtacgaccttgtgactgaccttataaccttagag
gacacgagtaacaaaggtctggcgctgtacatggctggacggtactcggaaagtgtcaaa
gtttacaccgccgcccttgacttagctgaaacggaggaagaacagtcacatgtgtctgtt
gctatagggatggtccactatggggccggagacctggacaccaccaagactgtcctcttt
caaagttatcagatgaccccaccctcaaggattggcctgcttgctctgtgtgcccttggg
atcctgcagacagatatgaccttgaccttagctgtccttcaggaacttttggcgggaaca
gggtcatccagtcagtcagatgtcgctcacctcatggccactgccaatgctgtacttgag
ggtaatccatctgcagccaaaaactttatccagcagtgtatacataaacatccggaccaa
gtggatctgtggcgcctcctggggtctgttcttatcacgcattgccatgataccactgca
gtgactggtgctgccacctgtgcacagaaagttcacactcttaacccaacgttacctggt
ataatgaagctggtgaccagtgctcagctagctggtggacatcacagtcggaccaacaga
aaaggggtgttgtccagtgcccagagggcagttcatctaaacccagaccagatggggaac
tggtgtaacttgacggcagccgtccacagtcatactgtattccatggtgacaagacggac
aagcttactgaacttatcctcctctatctaaactggatctcatcaacattcactgatact
ccaaacatattgacaagttggtgtaaaagacaaagagttgtttcccttgtcgaggctggc
agagtagatgaagcccaacaattacttagcaagttaaagagttgtaaagatccggagctg
gtagattttgcgacaaccataacaacagtactgagtggagacataggggccatgtcacaa
cagctactacagtcacggaccgacacaattctcctcgaggctttgttggagacgtgcgag
ctgggaggggtcaatgttaacctcaacgacatactaggggagatggaggaggacagagga
aggagaactgagtttgtttgtagggtgctacatgtgtattacatgtacaaacaggcaaag
aggaccagtgttcaggatgacaatgattacctggagatgaagaaggcagtgacagcagta
caacagctagactcccattgtcttccggtgatgctgctactgggcactgccagtctgaca
gtcaaccccagactgaccaagcactgtgttgttaaagtaagcgagggaggtcgtctacaa
attgacaagggtgatgaagtctccatagcaagatgcctcctcatcaaactcatatacaac
ccaaacaaagagtcagaaccactccagaaactattggccgaagcagcagaggagggggat
gtggttgctctggacttctacaacgttctctccacaaccaactga
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integrated database retrieval system
