Myxococcus hansupus: A176_004562
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Entry
A176_004562 CDS
T04077
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mym
Myxococcus hansupus
Pathway
mym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A176_004562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mym03021
]
A176_004562
03019 Messenger RNA biogenesis [BR:
mym03019
]
A176_004562
Transcription machinery [BR:
mym03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A176_004562
Messenger RNA biogenesis [BR:
mym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A176_004562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
NACHT
Spore_III_AA
ResIII
AAA
Motif
Other DBs
NCBI-ProteinID:
AKQ67650
UniProt:
A0A0H4X1X3
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All DBs
Position
5701580..5703151
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AA seq
523 aa
AA seq
DB search
MSENPDNRDPRDVPPVPAARAVAPPEPDDDGGDEGDDEGPDDDSGAGGPQGGPGQPGQGT
GRRRRRRRRRRRRRRRRGAQVLFTPDGQAYRMQPGPDGQQVQVFLTPQELEQYRQRQAQQ
QQQQQQAPQQQPGHGGGQPQQQQQHGRHGGGQQASQQANLTPVEGVLDTEAKGPNAFLRQ
LKRNLLAAPDDPELPKNLVQKLRLRQGQYIHAFAQMRGHKGVIQKVDSVDGRPLEGAPRL
PHFADLTSVDPTERLKLESGHKEMVTRVLDLISPIGKGQRALIVAPPKTGKTIMLQRIAQ
AVISNHPECHVMVVLIDERPEEVTDMRRGIKAEVLASSSDRPTADHLKVAELALERARRL
VESGKDVVILLDSITRLARAFNKEVDNSGRTMSGGVDSRALERPKRIFGAARATEEAGSL
TIIGTALIDTGSRMDEVIFEEFKGTGNSEVTLDRLLAEKRVFPAVNIAQSGTRKEEKLFT
LREYEKVKKLRQMLFSVKPVEAMEALVKRLSRYTYNDEFLDEL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaccccgataaccgcgaccctcgtgatgtgccccctgttcccgctgcccgc
gccgtggccccgcccgagccggacgacgacgggggcgacgagggcgatgacgagggtccc
gatgatgattccggcgcgggtggcccccagggtggccccggacagcccggccagggaacg
ggccgccgccgccgccgccgccgccgccgccgccgccgccgccgccgtcgtggcgcgcag
gtcctcttcacgccggacggtcaggcctaccggatgcagccggggccggatggccagcag
gtgcaggtcttcctgacgccgcaggagctggagcagtaccggcagcgccaggcgcagcag
cagcaacaacagcagcaggcgccgcagcagcagccgggccatggcgggggccagccgcag
cagcaacagcagcacgggcgccacggcggcgggcagcaggcctcgcagcaggcgaacctg
acgccggtggaaggcgtgctggacacggaggcgaagggccccaacgcgttcctgcgtcag
ctcaagcgcaacctgctggcggcgccggacgacccggagctgcccaagaacctggtccag
aagctgcggctgcggcagggtcagtacatccacgccttcgcgcagatgcggggccacaag
ggtgtcatccagaaggtggactcggtggacgggcgcccgctggaaggcgcgccgcggctg
ccgcacttcgccgacctgacgtcggtggaccccaccgagcggctcaagctggagagcggg
cacaaggagatggtgacccgggtgctggacctcatctcgcccattggcaagggccagcgc
gcgctcatcgtcgcccctccgaagacgggcaagacgatcatgctccagcgcatcgcccag
gccgtcatctccaaccacccggagtgccacgtcatggtggtgctcatcgacgagcggccc
gaggaagtcaccgacatgcggcggggcatcaaggcggaggtgctggcctccagctccgac
cgccccaccgccgaccacctcaaggtcgcggagctcgccctggagcgcgcgcgccggctg
gtggagtcgggcaaagacgtggtcatcctcctggactcgattacccgtctggcccgcgcc
ttcaacaaggaggtcgacaactccggccgcaccatgtccggcggcgtggacagccgcgcc
ctggagcgccccaagcgcatcttcggcgccgcccgcgcgacggaggaggcgggctcgctg
accatcatcggcacggcgctcatcgacaccggcagccgcatggacgaggtcatcttcgag
gagttcaaggggaccggtaactccgaggtcaccctggaccgcctgctggcggagaagcgc
gtcttccccgccgtcaacatcgcccagtccggcacccgcaaggaggagaagctcttcacc
ctgcgcgagtacgagaaggtgaagaagctgcggcagatgctcttctccgtgaagccggtg
gaggccatggaggcgctcgtgaagcggctgtcgcgctacacgtacaacgacgaattcctc
gacgagttgtag
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